Pairwise Alignments

Query, 537 a.a., Colistin resistance protein EmrB from Xanthobacter sp. DMC5

Subject, 511 a.a., multidrug efflux transport system - permease subunit from Pseudomonas putida KT2440

 Score =  251 bits (640), Expect = 6e-71
 Identities = 147/495 (29%), Positives = 245/495 (49%), Gaps = 11/495 (2%)

Query: 45  FMAILDIQIVSASLAEIQAGLAASSDEISWVQTSYLIAEVVMIPLSGFLSRALSTRWLFA 104
           FM +LD  I + +L  I   L  S ++ +WV TS+ ++  + +PL+G+LSR      LF 
Sbjct: 26  FMQVLDTTIANVALPTISGNLGVSYEQGTWVITSFAVSNAIALPLTGWLSRRFGEVKLFI 85

Query: 105 ASAAGFTIMSFMCATASSINEMIVYRALQGFLGGGMIPTVFAAAYSVFPREKQPIVAPMI 164
            +   F + SF+C  A S+ E++ +R LQG + G + P       +V+P  K+ +   ++
Sbjct: 86  WATLLFVLASFLCGIAQSMPELVGFRVLQGVVAGPLYPMTQTLLIAVYPPAKRGMALALL 145

Query: 165 GLVATLAPTIGPTVGGYLTDLFSWHWLFLINVIPGMFVVLAAVTLIDFDEPDFSLLDKFD 224
            +V  +AP  GP +GG++TD +SW W+F INV  G+F   A V       P  +     D
Sbjct: 146 AMVTVVAPIAGPILGGWITDSYSWPWIFFINVPIGLFAA-AVVRQQMRTRPVVTSRQPMD 204

Query: 225 WWGLLFMAGFLGSLEFVLEEGPTNDWFEDQYIVAFAIVCAVSSLAFFARVFSTDHPVVDL 284
           + GLL +   +G+L+ VL++G   DWFE  +I+  +++  V    F     +  HPVV+L
Sbjct: 205 YIGLLTLIIGVGALQVVLDKGNDLDWFESSFIIVGSLISVVFLAVFVIWELTDRHPVVNL 264

Query: 285 RAFENRNFTIGSAFSFIMGIGLYGLTYLYPVFLGRVRGYSALQIGETMFVTGIAMFLTAP 344
           R F +RNF IG+        G +G+  + P +L    GY+A   G  +   G+   + +P
Sbjct: 265 RLFVHRNFRIGTIVLVGGYAGFFGINLILPQWLQTQMGYTATWAGLAVAPIGLLPVIMSP 324

Query: 345 IAGRLMTKIDPRIMMGAGFAAFAVGTWWVTFITKDWDFWELFVPQILRGVGLMIAMIPIN 404
             G+   + D R++ G  F A     +     T + DF  + + Q+  G+G+ +  +P  
Sbjct: 325 FVGKYAHRFDLRVLAGLAFLAIGTSCYMRAGFTSEVDFQHVALVQLFMGIGVALFFMPTL 384

Query: 405 NISLGTMPPAQMKNASGLFNLMRNLGGAVGLALINTVLNNRWDLHIARLHEHVEWASATA 464
           +I L  +PP Q+ + SGL   +R LGG+   +L   +   R D H A L EH+     T 
Sbjct: 385 SILLSDLPPHQIADGSGLATFLRTLGGSFAASLTTWIWIRRADQHHAYLSEHISQFDPTT 444

Query: 465 VERLDTITAGFAKLGSDASSAALKQMAAIVRQQALVMAFADVFYLLTFLFFALVIASPLM 524
              L+ +          AS  +  Q+  I+  QA +M+  D F L++++F  L++     
Sbjct: 445 RHTLEQL--------GGASPQSYAQLEQILNGQAYMMSTVDYFTLMSWVFAGLILLVWFA 496

Query: 525 RRPKPGAGG--GGGH 537
           + P     G    GH
Sbjct: 497 KPPFTAKAGPASAGH 511