Pairwise Alignments

Query, 350 a.a., hypothetical protein from Xanthobacter sp. DMC5

Subject, 345 a.a., Hydroxymethylpyrimidine ABC transporter, substrate-binding component from Variovorax sp. SCN45

 Score = 49.7 bits (117), Expect = 1e-10
 Identities = 59/238 (24%), Positives = 101/238 (42%), Gaps = 55/238 (23%)

Query: 65  GLKMEMIQLAASPAITEALVSGAGDVGTLSDFAAVTTMAIGAPVTTVSSQAR---FRSAV 121
           GL +E+   A      +A+V G+ DV +            GA   T++ QA+   F++ V
Sbjct: 63  GLDVEISDFAGGARALQAVVGGSADVCS------------GAYEHTINLQAKNQFFQAFV 110

Query: 122 L-----------ATKK-SGITKMSDLKGKQVYGTFGITAFQNAQDAVLKAGLVPGKDMTF 169
           L           +TK  +G T + DLKGK++  +   ++     + VL  G +   D+++
Sbjct: 111 LQGRAPQIAVGVSTKNMAGYTGIQDLKGKKIGVSAPGSSTNMVANLVLSRGGLKASDVSY 170

Query: 170 VNVGPAELA-DAVGAQRIDAFFTYDPFVSFFESTGNAVVVSENLS------------PVI 216
           + VG A  A  A+ + +IDA    DP ++  E  G+  ++S+  +            P  
Sbjct: 171 IGVGVAAGALTALRSGQIDAISNTDPVMTMLEQKGDVKIISDTRTLKGTQQVFGGTMPAA 230

Query: 217 VLAANNRFLQK-PDVLRRLLLANAQALFFAAQNNDLANSWFRSLEPA---KNIPEPVL 270
            L A+  F+QK P+  + L  A    L            W ++  P    K +PE  L
Sbjct: 231 CLYASTEFIQKNPNTCQALANAIVHGL-----------KWLQTAGPGDIIKTVPETYL 277