Pairwise Alignments

Query, 341 a.a., HTH-type transcriptional regulator GbpR from Xanthobacter sp. DMC5

Subject, 310 a.a., Transcriptional regulator PcaQ from Pseudomonas putida KT2440

 Score =  107 bits (267), Expect = 4e-28
 Identities = 86/313 (27%), Positives = 145/313 (46%), Gaps = 12/313 (3%)

Query: 11  SRLRFKQLRLVDVLGRTGNLRRTAAELNMTQPAATKILQDLEETLGVKLFERTPRAMLAT 70
           +R++++ L     + R G+L R A  L+++QPA +K L++LE+ L  +LFER+ + +  T
Sbjct: 5   TRIKYRHLLCFLEIARQGSLARAADILSISQPAISKTLKELEDLLEARLFERSRQGVELT 64

Query: 71  EIGAHVVDYAR---RALTDGERFAGALANLKRGGYGALALGAIMATASDLLPRAIAELKR 127
             G   + YA    +AL DG     +L    R     + +G +      L+P  +  L +
Sbjct: 65  PAGTRFMRYAGPSVQALRDG---VSSLRGEARAP-SQVRIGVLSTVEGLLMPEVLCRLHQ 120

Query: 128 QRPLMTIQVLATTSDQLIAALGRGELDLVIGRLPTSEDRAKFDFEPLSKEELWAFAAASH 187
           +   + I V+   S QL+  L  GEL+LV+GR+  S       FE L  E +       H
Sbjct: 121 RHEALVISVVTGVSAQLLGQLHLGELELVVGRMTDSPQIQGLSFEHLYSESMSLVVRPGH 180

Query: 188 PLAGRRHLDLADMGDLPWVLQPAPSPMRRLIDTAFAAAGLRTLDNLVETSSIFATLNLVR 247
           PL     ++   +G  P VL PA + +R+  D+ F   G++     +ET S+  +   + 
Sbjct: 181 PLLASTPVERGQVGRYPLVLPPAGTTIRQHADSLFVQCGIQMPAQRLETLSLALSRRYLL 240

Query: 248 HAGMVSMLPSTIVAQEVAGGGFVRLPLEVKGELEPYGIV--TRKGVVTTPNAAEFLAILK 305
            +  + + P   V  ++  G  V L L V+   EP G V   R   +      +++  + 
Sbjct: 241 GSDGLWVAPRDAVLLDLRRGELVELDLGVR---EPGGSVGICRNAALPLSLPGQWVGEVL 297

Query: 306 VLVAREEGEGMNP 318
             VA E  EG  P
Sbjct: 298 REVAGEYREGRYP 310