Pairwise Alignments

Query, 167 a.a., putative RNA polymerase sigma factor FecI from Xanthobacter sp. DMC5

Subject, 174 a.a., putative RNA polymerase sigma factor FecI from Xanthobacter sp. DMC5

 Score = 70.9 bits (172), Expect = 1e-17
 Identities = 50/161 (31%), Positives = 78/161 (48%), Gaps = 2/161 (1%)

Query: 4   DLQRLFLRHAREINRFLRRRGHSAETAADLTQDTFVRLLAAAPRGNGDNPS-AYLHQVAR 62
           DL   ++R  R++   L RR  S + A +  Q+T++RL    P   G     A+L ++A 
Sbjct: 10  DLMLAYMRQWRDLRAHLCRRVGSRDLAEEALQETWLRLAGMGPAPVGVRDCHAFLLRIAG 69

Query: 63  NLSVDLYRRERLVEFVDLP-ATDFQGLADFAPGPEAVTYDRQRLAIVARALSELPEQTRT 121
           N+++DL RRER      +      +G+AD  P PEA    R  L ++  AL+EL ++ R 
Sbjct: 70  NIAIDLLRRERRHAARQISDEAVLRGIADATPSPEAYALHRDELRVLVHALAELEQRPRA 129

Query: 122 AFEMHRLGERTMQEIATDLHLSVSRTWALIRRAYLHLRASL 162
           A  + R    T  EI   + +S S     + +A  H R  L
Sbjct: 130 ALLLSRCDGLTHAEIGARMKVSDSMVAKYLVQALRHCRDRL 170