Pairwise Alignments

Query, 167 a.a., putative RNA polymerase sigma factor FecI from Xanthobacter sp. DMC5

Subject, 158 a.a., RNA polymerase sigma-70 factor, ECF subfamily from Pseudomonas putida KT2440

 Score = 61.2 bits (147), Expect = 8e-15
 Identities = 45/149 (30%), Positives = 73/149 (48%), Gaps = 1/149 (0%)

Query: 14  REINRFLRRRGHSAETAADLTQDTFVRLLAAAPRGNGDNPSAYLHQVARNLSVDLYRRER 73
           RE+  FL  R  S + A D+  D ++R+L        ++P A+L++ A NL VD +RR+ 
Sbjct: 6   RELVSFLSARLGSRQAAEDVAHDAYLRVLERTGSEQIEHPRAFLYRTALNLVVDRHRRQL 65

Query: 74  LVEFVDLPATDFQGLADFAPGPEAVTYDRQRLAIVARALSELPEQTRTAFEMHRLGERTM 133
           + +   L A D       +     +  D QRLA++ +AL EL    R +F + ++   + 
Sbjct: 66  VRQAEPLDALDADSRLHSSELQHDLQLD-QRLALMQKALDELSRPCRDSFLLRKIEGLSH 124

Query: 134 QEIATDLHLSVSRTWALIRRAYLHLRASL 162
           Q+IA  L +S S     I  A  H R  +
Sbjct: 125 QQIAERLGISRSLVEKHIVNAMKHCRVRM 153