Pairwise Alignments

Query, 167 a.a., putative RNA polymerase sigma factor FecI from Xanthobacter sp. DMC5

Subject, 171 a.a., RNA polymerase sigma-70 factor, ECF subfamily from Pseudomonas putida KT2440

 Score = 60.8 bits (146), Expect = 1e-14
 Identities = 50/143 (34%), Positives = 70/143 (48%), Gaps = 16/143 (11%)

Query: 8   LFLRHAREINRFLRRRGHSAETAADLTQDTFVRLLAAAPRGNGDNPSAYLHQVARNLSVD 67
           L+  H   +  +LR R   +E AADL QDTFVRLL A        P AYL  +AR L +D
Sbjct: 15  LYQSHHTWLRGWLRSRVGCSEHAADLAQDTFVRLLRARQMSPLKEPRAYLSSIARGLMID 74

Query: 68  LYRRERLVEFVDLPATDFQGLADFAPGPEA-VTYDRQRLAI------VARALSELPEQTR 120
            +RR  L           +GLA     PEA V  +  +L I      + RAL +L  + R
Sbjct: 75  QFRRRALERAYQ------EGLAHL---PEAEVPSEEDKLVILDSLERLDRALQQLKPRVR 125

Query: 121 TAFEMHRLGERTMQEIATDLHLS 143
            AF + +L   ++ ++A  L +S
Sbjct: 126 QAFLLAQLDGLSIVQVAQRLGVS 148