Pairwise Alignments

Query, 323 a.a., hypothetical protein from Xanthobacter sp. DMC5

Subject, 205 a.a., Cytochrome c4 from Pseudomonas putida KT2440

 Score = 62.0 bits (149), Expect = 1e-14
 Identities = 65/250 (26%), Positives = 98/250 (39%), Gaps = 71/250 (28%)

Query: 78  AHPPMPAVVAQGRHPDTRPCGVCHRPEGVG-GPENASLAGLPAEYMLRQIDDFRSGARST 136
           A  P+    A G+   T  CG CH P+G    P    LAG    Y+ +Q+ D +SG R+ 
Sbjct: 20  AAQPIKGDAAAGQ-AKTAVCGACHNPDGNSLAPNFPKLAGQGQRYLEKQLHDIKSGKRT- 77

Query: 137 GVKERTHVFRMVTALRNLSEQEIAEAVAYYAALKLPPRITVVETDTVPTSYVPFWYYTLK 196
                  V  M   L   S+Q++A+  AY+++ K                          
Sbjct: 78  -------VLEMTGMLAAFSDQDLADIAAYFSSQK-------------------------G 105

Query: 197 KDGASEPLAGRIIEMPDDEENFVNRDFHVTFTAYVPRGSIALGESIANEG-LGTRIPACI 255
             GA++P   +++E                            G ++ N G L   +PAC 
Sbjct: 106 SVGAADP---KLVER---------------------------GRALFNGGDLEKGMPACT 135

Query: 256 ACHGQGLKGI--GDIPPLAGRSPSYLVRQLYEFKHGLR--DGPMAAPMRATTEEMSLPEM 311
            CH     GI     P L G+   Y+ +QL +F+ G R  DG  A  MR    ++S  ++
Sbjct: 136 GCHSPNGAGIALAGFPHLGGQHSQYVAKQLTDFREGNRTNDGD-AMTMRTIAGKLSNHDI 194

Query: 312 VALAAYAASL 321
            ALA+Y   L
Sbjct: 195 EALASYIQGL 204



 Score = 33.9 bits (76), Expect = 3e-06
 Identities = 23/70 (32%), Positives = 33/70 (47%), Gaps = 4/70 (5%)

Query: 254 CIACHGQGLKGIG-DIPPLAGRSPSYLVRQLYEFKHGLRDGPMAAPMRATTEEMSLPEMV 312
           C ACH      +  + P LAG+   YL +QL++ K G R       M A   +  L +  
Sbjct: 38  CGACHNPDGNSLAPNFPKLAGQGQRYLEKQLHDIKSGKRTVLEMTGMLAAFSDQDLAD-- 95

Query: 313 ALAAYAASLK 322
            +AAY +S K
Sbjct: 96  -IAAYFSSQK 104