Pairwise Alignments

Query, 547 a.a., hypothetical protein from Xanthobacter sp. DMC5

Subject, 407 a.a., Cu(+)/Ag(+) efflux RND transporter periplasmic adaptor subunit CusB from Escherichia coli ECRC62

 Score = 52.8 bits (125), Expect = 3e-11
 Identities = 90/360 (25%), Positives = 135/360 (37%), Gaps = 47/360 (13%)

Query: 207 DARADAPKPAP---RDMAQRLPD------GSVIVPKPTQRILGVRTLVTASGAFAGTVEL 257
           + R D P  +P    D+  +  D      G  I P  TQ  LGV+T     G        
Sbjct: 52  NTRFDKPGKSPFMDMDLVPKYADEESSASGVRIDPTQTQN-LGVKTATVTRGPLTFAQSF 110

Query: 258 PGRVVPDANASGLVQSAVGGRLAPPEGGFKPL--GTKVAAGEILAYVHPPI---GASDLK 312
           P  V  +     +VQ+   G +        PL  G KV  G  L  +  P      S+  
Sbjct: 111 PANVSYNEYQYAIVQARAAGFIDK----VYPLTVGDKVQKGTPLLDLTIPDWVEAQSEYL 166

Query: 313 DLEQQGYELDQQIALVKRRYERLSAIPNAVTRREVEEAEIELNGLKTRRTKLERVQREPE 372
            L + G    Q   +++R   RL+ +P A  RR +   +I+     TR T          
Sbjct: 167 LLRETGGTATQTEGILERL--RLAGMPEADIRRLIATQKIQ-----TRFT---------- 209

Query: 373 ALRAPVAGVIAAADAVAGQMADPNTVVFRIVDPGRLWVEAV------GFSPDVGRSGAT- 425
            L+AP+ GVI A D  AG     + VV +I     +WV A           D  +   T 
Sbjct: 210 -LKAPIDGVITAFDLRAGMNIAKDNVVAKIQGMDPVWVTAAIPESIAWLVKDASQFTLTV 268

Query: 426 -GRLPNGRTVDLTFLGAGLPERAQALPLLFSVASDTRELRPGQFLTVFAEAGAPRIGIAI 484
             R     T+    L  G+    + L L   V +    L+PG    +     +  + + I
Sbjct: 269 PARPDKTLTIRKWTLLPGVDAATRTLQLRLEVDNADEALKPGMNAWLQLNTASEPM-LLI 327

Query: 485 PRSAVVRGANGQSIVYAHVSAERFVSLEVKTAPLDAARMLVLAGLSPGQRVVTDGAELID 544
           P  A++   N Q ++       RFV   V           + +GL+ G++VV+ G  LID
Sbjct: 328 PSQALIDTGNEQRVITVDADG-RFVPKRVAVFQASQGVTALHSGLAEGEKVVSSGLFLID 386