Pairwise Alignments
Query, 1090 a.a., Efflux pump membrane transporter BepE from Xanthobacter sp. DMC5
Subject, 1089 a.a., RND efflux system, inner membrane transporter from Variovorax sp. SCN45
Score = 262 bits (670), Expect = 9e-74
Identities = 268/1096 (24%), Positives = 481/1096 (43%), Gaps = 104/1096 (9%)
Query: 23 LTRTFIASPLTPLLLLAAFAFGLIALITLPREEEPQISVPMVDIRVSAQGLKAEDAVKLV 82
+ R A L+ L+L+A GLIAL LP E P+++ P V +R G + + V
Sbjct: 8 IDRPIFAGVLSLLMLIA----GLIALRGLPISEYPEVAPPSVVVRAQYPGANPKVIAETV 63
Query: 83 TEPLETIVKAIDGVEHVYSQTEDDGVL-VTARFLTGTSPDAAILRVHEKVRANLDRIPVG 141
PLE + ++G+ ++ SQ DGVL +T F GT PD A V +V R+P
Sbjct: 64 ATPLEEQINGVEGMLYMGSQATTDGVLTLTVTFRLGTDPDKAQQLVQNRVSQAEPRLPEE 123
Query: 142 ITE-PLIVGRSIDDVAILVLTLVPKPEAASRWTANDLTRVA-RELQADISKLPDIGLTYI 199
+ + +S D+ ++V + P +R+ N L A ++ ++++ +G I
Sbjct: 124 VRRLGITTVKSAPDLTMVVHLVSPN----NRYDINYLRNYAVLNVKDPLARIEGVGQVQI 179
Query: 200 VGEQPEEIRVAPDPERLSLYGITLAQLQGKLEGANRTFNTGTVREAAG------QRTLVA 253
G +RV DP++++ G++ + + + G N G V + G Q ++ A
Sbjct: 180 FGGGDYSMRVWLDPQKVAQRGLSASDVVAAIRGQNVQAAAGVVGASPGLSGVDMQLSINA 239
Query: 254 GQTLQTPSEIGGILLTS-RDGRPVYVRDVANVTLATQPAEHYVTHIEKGPDGLTRRPAVS 312
LQ+ E G I++ S DG +RD+ + + A++ + + L PAV
Sbjct: 240 QGRLQSEEEFGDIIVKSGTDGAVTRLRDIGRLEMGA--ADYSLRSL------LNNDPAVG 291
Query: 313 LAIAKRPGTNAVVIAEEVLRQIEAAHGSTLPADVEVKVTRNYGESANEKAN-ELLLHLGL 371
+ + + PG+NA+ I+ V + +E + +P +E ++ Y + +A+ E ++H L
Sbjct: 292 MGVFQAPGSNALDISANVRKTMEELN-KNMPEGLEYRIA--YDPTQFVRASIESVIHTLL 348
Query: 372 ATVSIVVLVG--FAIGWREALVVAVVIPTTILLTLFAARLMGYTLNRVSLFALIFSIGIL 429
+ +VVLV F WR +++ + +P +++ T ++G+++N +SLF L+ +IGI+
Sbjct: 349 EAIMLVVLVVILFLQTWRASIIPLLAVPVSVIGTFAVLHVLGFSINALSLFGLVLAIGIV 408
Query: 430 VDDAIVVIENIARHWAMKDGRSRAQGAIDAVAEVGNPTIVATLTVVAALLPMLFVSGMMG 489
VDDAIVV+EN+ R+ ++ G + + A+ EV P I L +VA +P+ F+SG+ G
Sbjct: 409 VDDAIVVVENVERN--IEAGLTPREATYRAMREVSGPIIAIALVLVAVFVPLAFISGLTG 466
Query: 490 PYMSPIPANASAAMVFSFFVAVVLTPWLMLKIAGRAGQDDAGHGGDHGEAADGGRLGRFY 549
+ + + V S ++ L+P L + G D G G L R +
Sbjct: 467 QFYRQFAVTIAISTVISAINSLTLSPALAALLL--RGHDQPKDALTRGMDRAFGWLFRGF 524
Query: 550 VRVARPILTSRARAG---------AFLATVGVATLA-SLSLFYTHAVTVKLLPFDNKTEL 599
++ S A +G A + + VA +A + LF AV +P +K L
Sbjct: 525 NKLFHR--GSEAYSGGVKNVISRKALMLAIYVALIAVTFGLF--KAVPGGFVPAQDKQYL 580
Query: 600 AVILDMPADTPVERTDSTLNAMVNALSDLPESVSFQTHAGTAAPFNFNGLVRHYGLRSAP 659
+P ++RTD + M + P F GL + G ++
Sbjct: 581 IGFAQLPDGATLDRTDEVIQRMGEIMKKNPN---------VEDAIAFPGLSIN-GFTNSS 630
Query: 660 KQGDIQINLKEKGERSRSSHEIALDVRNRLKSIALPSGSSLRVVEPPPGPPVLATL---- 715
G + LK +R R V +L + V+ PPP L T
Sbjct: 631 NSGIVFATLKPFDQRKRPDQSGGA-VAGQLNGAFAGIQDAFIVMFPPPPVAGLGTTGGFK 689
Query: 716 --LAEIYGPDPDTRRSVARKVRQAFESVPFIVDVDDSFGTPGERVRLAIDQDNLEFYKVE 773
L + D + + + P + + S+ ++ ID+ V
Sbjct: 690 LQLEDRASVGYDQMDAAVKAFMAKAQQAPELAGMFTSWQVNVPQLYADIDRTKARQLGVP 749
Query: 774 QGDVYDAIRGIFAGGTLGYSHRGGGRAPIPIRLEMSKGNKAVDERTLATPVPANALPGGR 833
D++D ++ I+ G GR +R++ +A E V + +
Sbjct: 750 VTDIFDTMQ-IYLGSLYANDFNKFGRT-YSVRVQADAPYRARAEDVGLLKVRSTS----G 803
Query: 834 GVVELGDVVRVVREPASFPIFRHNGRPAEMVTADLAGTYEAPVYGMMAVSKALENMDFGS 893
+V L +++V R+NG + AD+ G AP Y A+ + +
Sbjct: 804 EMVPLSALMKVNSTFGPERAMRYNG----YLAADINGG-PAPGYSSGQAQDAITKIAAET 858
Query: 894 LPKPVIALHGQPSDETKPTLLWDGEW-EVTWVTFRDMGGAFIV---AILGIYILVVAQFG 949
LPK V EW E+T+ AF+V AIL +++++ AQ+
Sbjct: 859 LPKGV-----------------SFEWTELTYQEILAGNSAFLVFPLAILLVFLVLAAQYE 901
Query: 950 SFKLPLVILTPIPLTFIGIMTGHWLFGAPFSATSMIGFIALAGIIVRNSILLVDFIRHAR 1009
S LP+ I+ +P+ + M G W+ G + + IG I L G+ +N+IL+V+F R
Sbjct: 902 SLTLPIAIILIVPMGIMAAMAGVWISGGDNNVFTQIGLIVLVGLSAKNAILIVEFARELE 961
Query: 1010 TPGRPLEEVLLQAGAIRFKPILLTALAAMIGAAVILT-----DPIFQGLAISLLFGLASS 1064
GR + ++A +R +PIL+T+LA ++G ++ + + + +++ G+
Sbjct: 962 FAGRTPVQAAIEASRLRLRPILMTSLAFVMGVLPLVLSTGAGSEMRKAMGVAVFAGMIGV 1021
Query: 1065 TALTVLVIPAIYVVLR 1080
TA + + P YV+LR
Sbjct: 1022 TAFGLFLTPVFYVLLR 1037
Score = 43.5 bits (101), Expect = 9e-08
Identities = 49/215 (22%), Positives = 90/215 (41%), Gaps = 9/215 (4%)
Query: 327 AEEVLRQIEAAHGSTLPADVEVKVTR-NYGESANEKANELLLHLGLATVSIVVLVGFAIG 385
A++ + +I A TLP V + T Y E + L+ L + V +V+ +
Sbjct: 847 AQDAITKIAA---ETLPKGVSFEWTELTYQEILAGNSAFLVFPLAILLVFLVLAAQYE-S 902
Query: 386 WREALVVAVVIPTTILLTLFAARLMGYTLNRVSLFALIFSIGILVDDAIVVIENIARHWA 445
+ + +++P I+ + + G N + LI +G+ +AI+++E AR
Sbjct: 903 LTLPIAIILIVPMGIMAAMAGVWISGGDNNVFTQIGLIVLVGLSAKNAILIVE-FARELE 961
Query: 446 MKDGRSRAQGAIDAVAEVGNPTIVATLTVVAALLPMLFVSGMMGPYMSPIPANASAAMVF 505
GR+ Q AI+A P ++ +L V +LP++ +G + A M+
Sbjct: 962 FA-GRTPVQAAIEASRLRLRPILMTSLAFVMGVLPLVLSTGAGSEMRKAMGVAVFAGMIG 1020
Query: 506 SFFVAVVLTPWLMLKIAGRAGQDDAGHGGD--HGE 538
+ LTP + + AG G+ HGE
Sbjct: 1021 VTAFGLFLTPVFYVLLRRLAGNRPLKLHGEVPHGE 1055