Pairwise Alignments

Query, 1090 a.a., Efflux pump membrane transporter BepE from Xanthobacter sp. DMC5

Subject, 1030 a.a., RND efflux transporter from Pseudomonas putida KT2440

 Score =  259 bits (662), Expect = 7e-73
 Identities = 259/1059 (24%), Positives = 453/1059 (42%), Gaps = 84/1059 (7%)

Query: 35   LLLLAAFAFGLIALITLPREEEPQISVPMVDIRVSAQGLKAEDAVKLVTEPLETIVKAID 94
            L++L AFA G +A   L R E+P  +V  + I  +  G  A++   LV EPLE  ++ + 
Sbjct: 22   LIVLIAFA-GTLAFFKLGRAEDPPFTVKQMTIITAWPGATAQEMQDLVAEPLEKRMQELR 80

Query: 95   GVEHVYSQTEDDGVLVTARFLTGTSPDAAI----LRVHEKVRANLDRIPVGITEPLIVGR 150
              +   + T   G+  T   L   +P +A+     +  +K       +P G+  P++   
Sbjct: 81   WYDRTETYTRP-GLAFTMVSLQDKTPPSAVQEEFYQARKKAGDQAKLMPAGVIGPML-ND 138

Query: 151  SIDDVAILVLTLVPKPEAASRWTANDLTRVARELQADISKLPDIGLTYIVGEQPEEIRVA 210
               DV   V  L  K E   +     L R A  L+  +  +P +    I+GEQ E I V+
Sbjct: 139  EFSDVTFAVYALKAKGEPQRQ-----LVRDAETLRQQLLHVPGVKKVNIIGEQAERIFVS 193

Query: 211  PDPERLSLYGITLAQLQGKLEGANRTFNTGTVREAAGQRTLVAGQTLQTPSEIGGILLTS 270
               +RL+  GIT   +   L+  N    +G+V     Q  +         ++I    + +
Sbjct: 194  FSHDRLATLGITPQDIFSALDNQNALSPSGSVETQGPQVVVRVDGAFDQLAKIRETPVVA 253

Query: 271  RDGRPVYVRDVANVTLATQ-PAEHYVTHIEKGPDGLTRRPAVSLAIAKRPGTNAVVIAEE 329
            + GRP+ + DVA+V    + PA   V +     DG    PA+ L I  R G N + + + 
Sbjct: 254  Q-GRPLKLSDVADVERGYEDPATFLVRN-----DG---EPALLLGIVMREGWNGLDLGK- 303

Query: 330  VLRQIEAAHGSTLPADVEVKVTRNYGESANEKANELLLHLGLATVSIVVLVGFAIGWREA 389
             L    A     +P  + +    +   +     +E ++   +A + ++++   ++GWR  
Sbjct: 304  ALEAETAKINEGMPLGMTLSKVTDQAVNITSSVDEFMIKFFVALLVVMLVCFLSMGWRVG 363

Query: 390  LVVAVVIPTTILLTLFAARLMGYTLNRVSLFALIFSIGILVDDAIVVIENIARHWAMKDG 449
            +VVA  +P T+ +        G   +R++L +LI ++G+LVDDAI+ IE +     M++G
Sbjct: 364  VVVAAAVPLTLAIVFVVMAATGKNFDRITLGSLILALGLLVDDAIIAIEMMV--VKMEEG 421

Query: 450  RSRAQGAIDAVAEVGNPTIVATLTVVAALLPMLFVSGMMGPYMSPIPANASAAMVFSFFV 509
              R + +  A +    P +  TL      +P  F     G Y S +      A++ S+ V
Sbjct: 422  YDRIKASAYAWSHTAAPMLSGTLVTAIGFMPNGFAQSTAGEYTSNMFWIVGIALIASWVV 481

Query: 510  AVVLTPWLMLKIAGRAGQDDAGHGGDHGEAADGGRLGRFYVRVARPILTSRARAGAFLAT 569
            AV  TP+L +K+  R    + GH   +          RF   +   I      AG  ++T
Sbjct: 482  AVAFTPYLGVKLLPRIKTIEGGHAAIYNTR----HYNRFRALLGWVIAHKWLVAGTVVST 537

Query: 570  VGVATLASLSLFYTHAVTVKLLPFDNKTELAVILDMPADTPVERTDSTLNAMVNALSDLP 629
              VA +  + L     V  +  P  ++ E+ V L MP  T +E+T++T   + + L    
Sbjct: 538  F-VAAVLGMGL-----VKKQFFPTSDRPEVLVELQMPYGTSIEQTNATAIKVESWLRQQE 591

Query: 630  ESVSFQTHAGTAAPFNFNGLVRHYGLRSAPKQGDIQINLKEKGERSRSSHEIALDVRNRL 689
            E+    T+ G   P  F  +         P    I +  + +G R    H +        
Sbjct: 592  EAKIVTTYIGQGPPRFFLAMAPEL---PDPSFAKIVVLTENQGAREALKHRL-----REA 643

Query: 690  KSIALPSGSSLRVVEPPPGPPVLATLLAEIYGPDPDTRRSVARKVRQAFESVPFIVDVDD 749
             S  L  G+ +RV +   GP     +   + GPD    R +A +V+   ++ P +  V+ 
Sbjct: 644  ASEGLAPGAQVRVTQLVFGPYSPYPVAYRVMGPDASQLRQIAARVQSVLQASPMMKTVNT 703

Query: 750  SFGTPGERVRLAIDQDNLEFYKVEQGDVYDAIRGIFAGGTLGYSHRGGGRAPIPIRLEMS 809
             +G     +  +++QD L+   +    V   ++ +  G  +             IR    
Sbjct: 704  DWGPLVPTLHFSLNQDRLQSVGLTSASVSQQLQFLLTGVPITSVRE-------DIRSVQV 756

Query: 810  KGNKAVDERTLATPVPANALPGGRG----VVELGDVVRVVREPASFPIFRHNGRPAEMVT 865
             G  A   R     +    L G  G    V ++GDV   + +P    + R +  P   V 
Sbjct: 757  VGRAAGQIRLDPAQIENFTLVGSNGQRVPVSQIGDVSIRMEDPI---LRRRDRTPTMTVR 813

Query: 866  ADLAGTYEAPVYGMMAVSKALENMDFGSLPKPVIALHGQPSDETKPTLLWDGEWEVTWVT 925
             D+A   + P     A+ K L+ +         I + G   +  K               
Sbjct: 814  GDIAEGLQPPDVS-TAIWKDLQPIVTQLPAGYKIEMAGSIEESAK--------------- 857

Query: 926  FRDMGGAFIVAILGIYI-----LVVAQFGSFKLPLVILTPIPLTFIGIMTGHWLFGAPFS 980
                    IV +L I I     +++ Q  S    +++    PL  IG++    LFG PF 
Sbjct: 858  ----ASQAIVPLLPIMIALTLLIIILQVRSISAMVMVFLTSPLGLIGVVPVLLLFGQPFG 913

Query: 981  ATSMIGFIALAGIIVRNSILLVDFIRHARTPGRPLEEVLLQAGAIRFKPILLTALAAMIG 1040
              +++G IAL+GI++RN+++L+  I H +  G    + +++A   R +P+LLTALAA++ 
Sbjct: 914  INALVGLIALSGILMRNTLILIGQIDHNQLEGLAPFDAVVEATVQRARPVLLTALAAIL- 972

Query: 1041 AAVILTDPIFQG-LAISLLFGLASSTALTVLVIPAIYVV 1078
            A + LT  +F G LA +L+ G    T +T++ +PA+Y +
Sbjct: 973  AFIPLTHSVFWGTLAYTLIGGTFVGTIMTLVFLPAMYSI 1011