Pairwise Alignments
Query, 1090 a.a., Efflux pump membrane transporter BepE from Xanthobacter sp. DMC5
Subject, 1021 a.a., efflux RND transporter permease subunit from Dickeya dianthicola ME23
Score = 254 bits (648), Expect = 3e-71
Identities = 271/1058 (25%), Positives = 452/1058 (42%), Gaps = 88/1058 (8%)
Query: 32 LTPLLLLAAFAFGLIALITLPREEEPQISVPMVDIRVSAQGLKAEDAVKLVTEPLETIVK 91
L +L A G+++ LPR E+P ++ + S G +D V VT+ LE ++
Sbjct: 21 LVAFFMLVIVAAGVMSYERLPRNEDPAFTIKTAVVSASWPGATVQDTVSFVTDVLEKKLQ 80
Query: 92 AIDGVEHV--YSQTEDDGVLVTARFLTGTSPDAAI-LRVHEKVRANLDRIPVGITEPLIV 148
++ + YS+ + + V R T S I + +K++ +P G+ EP V
Sbjct: 81 ETPYLDFIESYSRPGEAVIFVNLRDSTPPSEVQGIWYAIRKKMKDIAPSLPDGVGEPA-V 139
Query: 149 GRSIDDVAILVLTLVPKPEAASRWTANDLTRVARELQADISKLPDIGLTYIVGEQPEEIR 208
DD + A ++ +L +++ ++ PD+G ++G Q E+I
Sbjct: 140 NDEFDDTFGTIYGFT-----ADGYSPRELRDRVDDIRTELLATPDVGKIDVLGVQDEQIV 194
Query: 209 VAPDPERLSLYGITLAQLQGKLEGANRTFNTGTVREAAGQRTLVAGQTLQTPSEIGGILL 268
A P +L+ G+ L Q+ L+ N TG +R + L + + + L
Sbjct: 195 AAFSPRQLAGMGLDLQQVTAALQAQNAVSPTGAIRTDNDKVALRVSGAFVSEESLRQVTL 254
Query: 269 TSRDGRPVYVRDVANV--TLATQPAEHYVTHIEKGPDGLTRRPAVSLAIAKRPGTNAVVI 326
GR + + D+A V A PA + + +PA+ LA++ P N +
Sbjct: 255 HI-GGRFIPLTDIATVYRQAAEPPAPAF---------RVNGQPAIGLAVSMAPTGNMLDF 304
Query: 327 AEEVLRQIEAAHGSTLPADVEVKVTRNYGESANEKANELLLHLGLATVSIVVLVGF-AIG 385
+ LR A G++LP +EV + N + L L V IV+ V F ++G
Sbjct: 305 GQ-ALRSKMATIGASLPHGIEVINVADQSSVVKSSVNGFVKVL-LEAVVIVLAVSFVSLG 362
Query: 386 WREALVVAVVIPTTILLTLFAARLMGYTLNRVSLFALIFSIGILVDDAIVVIENIARHWA 445
R LVVA IP + +T + G L R+SL ALI ++G+LVDDA++ +E + +
Sbjct: 363 SRAGLVVAASIPMVLTMTFTGMEIAGIGLQRISLGALIIALGLLVDDAMITVEAMVS--S 420
Query: 446 MKDGRSRAQGAIDAVAEVGNPTIVATLTVVAALLPMLFVSGMMGPYMSPIPANASAAMVF 505
++ G +R Q A A P + TL +VA +P+ F + G Y + +++
Sbjct: 421 LEKGEAREQAATRAYDTTAFPMLTGTLVMVAGFIPVGFAASSAGEYCYSLFIVVLISLLS 480
Query: 506 SFFVAVVLTP----WLMLKIAGRAGQDDAGHGGDHGEAADGGRLGRFYVRVARPILTSRA 561
S+ VAV+ +P WL+ K A + DH GRL R Y R+ L R
Sbjct: 481 SWAVAVLFSPLIGVWLLPK---------AMNAHDH----HAGRLSRAYDRLLSTALRYRG 527
Query: 562 RAGAFLATVGVATLASLSLFYTHAVTVKLLPFDNKTELAVILDMPADTPVERTDSTLNAM 621
R + VA LA L++ + + P ++ EL V L +P + + T+ + +
Sbjct: 528 RT----LLLSVALLA-LAVVAAGRLEGEFFPASDRPELLVSLTLPRNASQQATEREVVRL 582
Query: 622 VNALSDLPESVSFQTHAGTAAPFNFNGLVRHYGLRSAPKQGD--IQINLKEKGERSRSSH 679
+L + P+ F T+ G +G VR Y Q + Q+ + KG + R +
Sbjct: 583 EQSLKNDPDLDHFSTYVG-------SGAVRFYLPMDVLLQNENIAQLVVVAKGLKERDAL 635
Query: 680 EIALDVRNRLKSIALPSGSSLRVVEPPPGPPVLATLLAEIYGPDPDTRRSVARKVRQAFE 739
L+ R + L + RV GPPV L + GPD D R A +
Sbjct: 636 RARLEKRLQQDFSHLVT----RVSPLELGPPVGWPLKYRVTGPDIDKVREYAAGLATLIG 691
Query: 740 SVPFIVDVDDSFGTPGERVRLAIDQDNLEFYKVEQGDVYDAIRGIFAGGTLGYSHRGGGR 799
P +V+ + G P +R+ ++Q + DV A+ IF+G +
Sbjct: 692 GNPDAREVNLTAGEPERAIRIDLNQTEARAVGISSQDVASALATIFSGSVVTSVRDRNRM 751
Query: 800 APIPIRLEMSKGNKAVDERTLATPVPANALPGGRGVVELGDVVRV---VREPASFPIFRH 856
+ +R ++ + + T+A+ + A G R V LG + V V EP I+R
Sbjct: 752 VGVVVR---ARDEERQNLDTVAS-LQLRAANGQR--VPLGQIASVGYGVDEPI---IWRR 802
Query: 857 NGRPAEMVTADLAGTYEAPVYGMMAVSKALENMDFGSLPKPVIALHGQPSDETKPTLLWD 916
P V DLA A + +LP G + E+
Sbjct: 803 QRLPFITVQTDLAPGVRAQTLSTTLAPQVAAYQ--AALPAGYHIEEGGSAAESN-----K 855
Query: 917 GEWEVTWVTFRDMGGAFIVAILGIYILVVAQFGSFKLPLVILTPIPLTFIGIMTGHWLFG 976
G V V V +L + IL++ Q F ++ L P IG++ G
Sbjct: 856 GNNSVYQV--------LPVTLLVMLILLMVQLQRFSRMMLALLMAPFGLIGVVAAMLPTG 907
Query: 977 APFSATSMIGFIALAGIIVRNSILLVDFIRHARTPGRPLEEVLLQAGAIRFKPILLTALA 1036
P +++G IALAG+I+RN+++L+ + G E ++ A R +PILLTALA
Sbjct: 908 TPMGFVALLGVIALAGMIIRNAVILISEVDTNTAAGMTTNEAIIHAARHRSRPILLTALA 967
Query: 1037 AMIGAAVILTDPIFQGLAISLLFGLASSTALTVLVIPA 1074
A++G I T + +A +++ GL +T LT+ V+PA
Sbjct: 968 AILGMIPIATQVFWGPMAYAIIGGLIVATLLTLTVLPA 1005
Score = 45.8 bits (107), Expect = 2e-08
Identities = 63/258 (24%), Positives = 102/258 (39%), Gaps = 27/258 (10%)
Query: 831 GGRGVVELGDVVRVVREPAS--FPIFRHNGRPAEMVTADLAGTYEAPVYGMMAVSKALEN 888
GGR + L D+ V R+ A P FR NG+PA + +A T +G SK
Sbjct: 257 GGR-FIPLTDIATVYRQAAEPPAPAFRVNGQPAIGLAVSMAPTGNMLDFGQALRSKMA-- 313
Query: 889 MDFGSLPKPVIALHGQPSDETKPTLLWDGEWEVTWVTFRDMGGAFIVAILGIYILVVAQF 948
SLP + ++ +D++ V + G V + + I++ F
Sbjct: 314 TIGASLPHGIEVIN--VADQSS-------------VVKSSVNGFVKVLLEAVVIVLAVSF 358
Query: 949 GSF--KLPLVILTPIPLTFIGIMTGHWLFGAPFSATSMIGFIALAGIIVRNSILLVDFIR 1006
S + LV+ IP+ TG + G S+ I G++V ++++ V+ +
Sbjct: 359 VSLGSRAGLVVAASIPMVLTMTFTGMEIAGIGLQRISLGALIIALGLLVDDAMITVEAMV 418
Query: 1007 HARTPGRPLEEVLLQAGAIRFKPILLTALAAM-----IGAAVILTDPIFQGLAISLLFGL 1061
+ G E+ +A P+L L + +G A L I +L L
Sbjct: 419 SSLEKGEAREQAATRAYDTTAFPMLTGTLVMVAGFIPVGFAASSAGEYCYSLFIVVLISL 478
Query: 1062 ASSTALTVLVIPAIYVVL 1079
SS A+ VL P I V L
Sbjct: 479 LSSWAVAVLFSPLIGVWL 496