Pairwise Alignments

Query, 342 a.a., Multidrug resistance protein MdtA from Xanthobacter sp. DMC5

Subject, 503 a.a., RND family efflux transporter, MFP subunit from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 58.9 bits (141), Expect = 3e-13
 Identities = 67/295 (22%), Positives = 125/295 (42%), Gaps = 24/295 (8%)

Query: 53  VVPARARIGGTVRSVTVSEGDKVKEGDEIALVVDDKNALTLNAADARIKELTSQLDNAKI 112
           V PA  R+  +  S  ++EG  VKEG  +  V      LT N   A I++  +  + AK 
Sbjct: 207 VAPATGRV--SFSSGVLTEGSPVKEGQVLMTV--SSTGLTSNNLGAEIQKARADYEQAKS 262

Query: 113 ELDRAQQLVARGVASQARLDTAKTQFDVA-TNQVTASQADRAVILQRAREGAVLAPADGR 171
           E +R ++L    +  ++  +  + ++ +A TN  T S        Q      V AP  G 
Sbjct: 263 EYERKKELYESKIVPKSEFEQVEQKYQIAKTNYETLSSGYSGGGKQ------VTAPIGGF 316

Query: 172 VLTVPVTPGSVVLAGDEIARVASGPYSL-RLSLPERHAASIREGGTVRIGERGISQDKAG 230
           + ++    G     GD +  V S   SL  + +  +++A ++    +    +    + A 
Sbjct: 317 IKSIQAVNGGFANQGDALVTVTSHKSSLLEVQVSPKYSAELKNIRNIWYQPK----EGAW 372

Query: 231 TPATARPGRIVKVYPEISAGRVMADVEVDGLGSYFVNERTLVWVEIGRRSV---LAVPAA 287
           +    + G+I+ V  E+ A + +  V  +      + E +    ++   S    L +P +
Sbjct: 373 SNLNEKGGKILSVDKEVEANQPLISVFAEVNEGVEMPEGSFTEAQLAVGSAMESLVIPVS 432

Query: 288 LIRTQHGIDYVTLATAGGPLDVP-VILGERFAGDDGERVEILTGLKDGDVISAAG 341
            +   +G   V +  +G   +   V LG+R    +G  VEI+ GL  G+V+   G
Sbjct: 433 CLMEDYGNYSVIVQLSGESFERRNVTLGKR----NGSEVEIIKGLSFGEVVVTKG 483