Pairwise Alignments

Query, 342 a.a., Multidrug resistance protein MdtA from Xanthobacter sp. DMC5

Subject, 360 a.a., RND family efflux transporter, MFP subunit from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 76.6 bits (187), Expect = 9e-19
 Identities = 83/307 (27%), Positives = 131/307 (42%), Gaps = 38/307 (12%)

Query: 44  VFGEVKSRTVVPARARIGGTVRSVTVSEGDKVKEGDEIALVVDDKNALTLNAADARIKEL 103
           V G V S   V  RA I G V S+   EG  VK+G  +  + DD              EL
Sbjct: 67  VTGNVLSNESVSLRAEITGLVESINFEEGQFVKKGTPLVYLNDD--------------EL 112

Query: 104 TSQLDNAKI-------ELDRAQQLVARGVASQARLDTAKTQFDVATNQVTASQADRAVIL 156
           T+QLD  +        +  R +QL+AR   SQ        ++D+  NQ   + +D  ++ 
Sbjct: 113 TAQLDRLEYTKKLYEGQESRQKQLLAREAISQ-------EEYDIILNQYNTTLSDIKLVK 165

Query: 157 QRAREGAVLAPADGRVLTVPVTPGSVVLAGDEIARVAS-GPYSLRLSLPERHAASIREGG 215
            +  +  + AP DG +    ++ GSV+   D IA + +  P  +  S+PER+A+ ++ G 
Sbjct: 166 AQLDKTVIKAPFDGVLGLRQISAGSVISTTDIIANIVNIDPIKIEFSIPERYASQVQVGS 225

Query: 216 TVRIGERGISQDKAGTPATARPGRIVKVYPEISAGRVMADVEVDGLGSYFVNERTLVWVE 275
           T+          K G      P  I      ++   +  + +   L   FVN R  + VE
Sbjct: 226 TIEFSNNASHGLKKGKVYAYEP-VIDANTRTLTLRAISPNEDRKFLPGMFVNIRFNLEVE 284

Query: 276 IGRRSVLAVPA-ALIRTQHGIDYVTLATAGGPLDVPVILGERFAGDDGERVEILTGLKDG 334
                 L VP+ +LI   +G     +   G   +  V +G R    D E V+IL GL  G
Sbjct: 285 ---EDALLVPSQSLIPELNGYKLFLVNQEGIVQERQVQIGIR---TDSE-VQILDGLSPG 337

Query: 335 DVISAAG 341
           +++   G
Sbjct: 338 EMVLTTG 344