Pairwise Alignments

Query, 342 a.a., Multidrug resistance protein MdtA from Xanthobacter sp. DMC5

Subject, 425 a.a., Efflux pump periplasmic linker BepF from Alteromonas macleodii MIT1002

 Score = 55.5 bits (132), Expect = 2e-12
 Identities = 46/171 (26%), Positives = 74/171 (43%), Gaps = 15/171 (8%)

Query: 32  TVRSVEVPELKGVFGEVKSRTVVPARARIGGTVRSVTVSEGDKVKEGDEIALVVDDKNAL 91
           TV S  + E     G ++S  +V  R R+ G +  V   EG+ V++G  + L+ +     
Sbjct: 45  TVVSQRLTEWDNFTGRLESPQIVALRPRVSGYIDFVAFDEGEYVEQGQTLFLIDN----- 99

Query: 92  TLNAADARIKELTSQLDNAKIELDRAQQLVARG-------VASQARLDTAKTQFDVATNQ 144
                 A +  LT+QL+ AK  +  A+Q  +R          S+  LD    + + A   
Sbjct: 100 --RTFKAEVDRLTAQLEEAKSRVQLAEQNYSRAFKLRKTQAVSEEVLDARLAEKNQALAS 157

Query: 145 VTASQADRAVILQRAREGAVLAPADGRVLTVPVTPGSVVLAGD-EIARVAS 194
           +  +QA   V         V AP  GR+    +T G+ V AG  E+ R+ S
Sbjct: 158 LNQTQAALEVARLNRGFARVEAPISGRISRANITEGNFVTAGQTELTRIVS 208