Pairwise Alignments

Query, 728 a.a., Ferrichrome outer membrane transporter/phage receptor from Xanthobacter sp. DMC5

Subject, 833 a.a., ligand-gated channel from Pseudomonas simiae WCS417

 Score =  405 bits (1041), Expect = e-117
 Identities = 270/769 (35%), Positives = 396/769 (51%), Gaps = 71/769 (9%)

Query: 22  KSRQSLAAKPFSTIALTARSLLATSAL----IVPVSFGMAQAQEAAPSVALPTVNVEGV- 76
           K  Q L+ +  + +ALT   LL+ S L    +    + +    +   ++ L    + G  
Sbjct: 74  KRSQGLSGQYDTDVALT--QLLSGSGLQALKLSADRYRLESIPDNGGAMELQATTISGAY 131

Query: 77  -AETAWGPVEGYVATRSGAGTKTDTPLIDTPRSVSVVTRQEMDDRGVQNVVDAVSYTAGV 135
            AE+  GPV GYVATRS +GTKTDT LI+TP+S+S+VT+ +M  +  +++   + Y+A V
Sbjct: 132 QAESPTGPVSGYVATRSLSGTKTDTALIETPQSISIVTKDQMRAQNAESLNQILRYSAAV 191

Query: 136 LTGSYGYDP-RFDDIYIRGFSVSSRGNFRDSLAQPSANFASWRTETYGLERIDVIKGPAS 194
           +  + G    R D + IRGFS ++   + D L  PS+  A  + + + LER++V++GPAS
Sbjct: 192 IPETRGATASRLDQLTIRGFSPAT---YLDGLRMPSSRDALPQKDAFDLERVEVLRGPAS 248

Query: 195 VLYGQTVPGGLINRISKMPVDTPFAEVEGQLGDPAWSQAAFDVGGRANADGSVLYRLTGV 254
           VLYGQ  P G+IN +SK P+DTPF EV  + G     +  FD+ G  +  G   YR+ G+
Sbjct: 249 VLYGQGTPSGVINMVSKRPLDTPFHEVGVEYGTFNKKRTTFDLSGPMDDQGVYSYRVAGL 308

Query: 255 ARAADGTVSYSTNNALYLAPAVTFQ-NETTRLTILGTVLDSRTPSNTQYWQTPT--MLTR 311
              ADG V ++      L+ A T++ ++ T LT+LG     + P    Y   P    +  
Sbjct: 309 FDDADGQVEHTETRRQSLSSAFTWRPDDATSLTLLGHF--QKDPKGASYGSVPAWGSVLH 366

Query: 312 IPMGTT-----------YNAIQQTQEQIGYQLEHAFNDVWSAKQNVRYGHIDNHSMWMDA 360
            P G +           +    +    IG+  EH F+DVW+ +QN RY   +     + +
Sbjct: 367 SPTGRSIDVDFYDGEKNFEKSDREYYSIGWAFEHHFDDVWTVRQNARYLRSEGQYRSLYS 426

Query: 361 NGVMNGPLISMTATNYIET-VNSFQADNQLQAKFTTGPVEHKVLGGVDY--LWLDSSYGM 417
           N +M        +T   +  ++++  DNQ+QAKF TGP++H +L G+DY     D+  G 
Sbjct: 427 NYLMADYRTIRRSTIASDVDLDAYTLDNQVQAKFDTGPLQHTLLMGLDYQNTSTDTLSGS 486

Query: 418 GDGPAG-DVNIFNPNVPNLLVMPAITSRDGAGLNQVGLYLQDQMAFGNGWRFLIGGRQDF 476
           G   AG  ++IFNP     + +PA T+   +   Q G+YLQ+QM + + W  L+GGR D+
Sbjct: 487 GVYTAGPTLDIFNPVYGAAVPVPAYTTDGTSRSEQTGVYLQEQMKW-DKWVLLLGGRYDW 545

Query: 477 ASTSQSSFGIETAGR-----DDQAFTWQAGLLYAFENGVSPYVSYATSFLPSINVDQSGQ 531
           AST  S+  + +  +     D +AFT + GL+Y F+NG++PY SYA SF P       G 
Sbjct: 546 ASTDNSTQTLSSGAKSKSSLDSKAFTGRIGLVYLFDNGLAPYASYAESFNPQSGTGYGGS 605

Query: 532 LLEPSSGEQYEAGVKYQPKGGRSFFTLSAYQITQNNYAVPDPVSFFYLPV-------GNV 584
           + +P+ G+QYE G+KYQP G  SF T + + + Q N    DP               G V
Sbjct: 606 VFKPTEGKQYEIGIKYQPPGSNSFITAAIFDLRQTNVLTTDPDPTHLCGTGRCQSQDGEV 665

Query: 585 RVRGFEAEALVELAQGLDLTAAYTFTQGRIINSLDV------------PTI---GNTPPN 629
           + RGFE E    L   LD+TAAY +   RI  S +             P I   G T   
Sbjct: 666 QSRGFELEGKASLNDNLDITAAYAYLDNRISKSNNTVRYAPISDIGVGPAIAAEGTTTYG 725

Query: 630 MPAHIASLWAKYTVQDGDWKGFGVGGGIRYIGPFWSDTNNLYKNGAQYPVDAALYYE--- 686
           +P H AS WA YTV DG  KGFGVG G RY+G  W DT N  K       DAA++Y+   
Sbjct: 726 VPRHTASAWADYTVHDGKLKGFGVGAGARYVGSSWGDTANTLKVPGYTLFDAAVHYDIPN 785

Query: 687 ----KDNWNFQLNAKNVFGQQNALLNEGY---WYWQQGRSVIASVRYRW 728
               KDN    LNA N+  ++       Y   WY  Q R+V AS  Y+W
Sbjct: 786 IARLKDNLRLALNATNLANKEYVASCYSYSWCWYGSQ-RTVQASATYQW 833