Pairwise Alignments

Query, 291 a.a., hypothetical protein from Xanthobacter sp. DMC5

Subject, 288 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  108 bits (271), Expect = 1e-28
 Identities = 79/262 (30%), Positives = 123/262 (46%), Gaps = 2/262 (0%)

Query: 2   IRNLDLDLIRSFAAVADLGSISAAARKVGRSQSAVSLQMDRLAEAVGFSLLERRGRAVSP 61
           ++ LD+D +++F  VAD  S + AA  +  SQ+A+SL++ RL E +G+ LLER  R V  
Sbjct: 5   LKPLDIDTVQAFVLVADFASFTRAAEALDTSQAAISLKLKRLEERLGYRLLERTPRHVRL 64

Query: 62  TPRGAAFLEDARRLLDLNDRILTQHVHGAFAQPLRLGFVQDVGEQVLQRILYRLSASFPQ 121
           +PRG  F+  AR LL+ ++R L   +     + L +G    V    L   L RL+A  P 
Sbjct: 65  SPRGEQFIVAARALLNAHERALAD-MGNPLLRRLVIGISDHVAGPDLPTWLSRLAAYDPL 123

Query: 122 APITVRVCTTTHMLDMLRAEELDVAVGFRSESELPASLLLRESMVWIAARQLRLDREAPV 181
             + VR+ ++  ++      ELD  +           +L  E   W AA   +    AP+
Sbjct: 124 VILEVRIASSRDLVAAFDRNELDAVIVRNEGDRQDGEVLAVERFGWFAAPTWQHSPGAPL 183

Query: 182 PLVLFEHPCSCRTAAIAALNAAGRPFRIAFTSPSLPGLMAAVGAGMGVTVRSPRALRPDL 241
            +     PC  R  A  AL+ A   +   F    +  + AAV AG+GV   + R      
Sbjct: 184 RMATMAAPCGVRHLATRALDEARIDWTEVFVGGGVMAVGAAVSAGLGVAALAHRVAPTGA 243

Query: 242 AVVAD-LDRAALPDMEFLLYTR 262
             V++      LP  E +LY+R
Sbjct: 244 VEVSEQYGLPPLPVSEVVLYSR 265