Pairwise Alignments

Query, 402 a.a., hypothetical protein from Xanthobacter sp. DMC5

Subject, 382 a.a., Type II restriction adenine-specific methylase (EC 2.1.1.72) from Sphingobium sp. HT1-2

 Score =  475 bits (1223), Expect = e-139
 Identities = 227/350 (64%), Positives = 276/350 (78%), Gaps = 3/350 (0%)

Query: 41  ALPLNEILIGDTIARMAALPAGSVDLVFADPPYNLQLGGELKRPDESRVDAVDDHWDQFE 100
           A+  N +L GD IA MA LP G +D++FADPPYNLQLGG+L RP+  RVDAVD+ WD+F+
Sbjct: 27  AIEANRLLRGDCIAEMAKLPDGCIDMIFADPPYNLQLGGDLFRPEGGRVDAVDNDWDKFD 86

Query: 101 SFAAYDAFTRAWLLAARRALKPNGTLFVIGSYHNIFRVGALMQDLGFWILNDIIWRKANP 160
           + ++YD FT+AWL  ARR LKPNGT++VIGSYHNIFRVGA +QD GFWILNDIIWRKANP
Sbjct: 87  TLSSYDRFTKAWLAQARRILKPNGTIWVIGSYHNIFRVGAALQDEGFWILNDIIWRKANP 146

Query: 161 MPNFRGRRFTNAHETLIWAARSADSKYTFNYEALKAGNEDVQVRSDWLFPLCTGQERLKD 220
           MPNF+G RFTNAHETLIWA++  D+KYTFNY+A+K  N+++Q+RSDW+ P+C GQERLK 
Sbjct: 147 MPNFKGTRFTNAHETLIWASQGEDAKYTFNYKAMKTLNDELQMRSDWVLPICGGQERLK- 205

Query: 221 EKGRKLHPTQKPEALLARVLLSSTKPGDVVLDPFFGSGTTGAVAKRLRRSFIGIEREETY 280
             G K HPTQKPE+LL RV+LS TKPGD+VLDPFFG+GTTGAVAKRL R +IGIERE  Y
Sbjct: 206 RNGTKAHPTQKPESLLYRVMLSCTKPGDIVLDPFFGTGTTGAVAKRLGRQWIGIEREPDY 265

Query: 281 AEAARARIDAVEPLSEEALVAPPSAREAPRVAFSALVERGLVTPGAELTDAKGRFRAVVR 340
            E A  RI    PL E AL    +AR+ P+VAF  LVE G + PG+ + D+K R+ A VR
Sbjct: 266 IEVAEERIAEALPLDESALAIMQTARQQPKVAFGTLVETGYLQPGSVVMDSKRRWSATVR 325

Query: 341 ADGTISLADSPNVGSIHRVGALAQGAEACNGWTFWHVEEAGRRHPIDILR 390
           ADG  SLA   + GSIH++GA  QGA +CNGWTFWH+E+AG+ HPID LR
Sbjct: 326 ADG--SLAVGSDTGSIHKLGATLQGAPSCNGWTFWHIEKAGKLHPIDTLR 373