Pairwise Alignments

Query, 402 a.a., hypothetical protein from Xanthobacter sp. DMC5

Subject, 350 a.a., site-specific DNA-methyltransferase from Erwinia tracheiphila SCR3

 Score = 50.4 bits (119), Expect = 8e-11
 Identities = 27/71 (38%), Positives = 41/71 (57%), Gaps = 3/71 (4%)

Query: 227 HPTQKPEALLARVLLSSTKPGDVVLDPFFGSGTTGAVAKRLRRSFIGIEREETYAEAARA 286
           HP +KP  +L +++ +S++PGDVV D F GSG+T   A  L R  IG+E E    E    
Sbjct: 283 HPCEKPADMLKQIISASSRPGDVVADFFMGSGSTLKAAIDLGRKAIGVELE---TERFNQ 339

Query: 287 RIDAVEPLSEE 297
            ++ +  L E+
Sbjct: 340 TVEEISALPEK 350



 Score = 44.3 bits (103), Expect = 6e-09
 Identities = 32/114 (28%), Positives = 51/114 (44%), Gaps = 19/114 (16%)

Query: 46  EILIGDTIARMAALPAGSVDLVFADPPYNLQLGGELKRPDESRVDAVDDHWDQFESFAAY 105
           E++  D +  +A LP  S+DL+  DPPY            + + +  D+ W   E +  +
Sbjct: 11  ELINADCLHYIATLPDNSIDLIVTDPPY-----------FKVKPNGWDNQWKGDEDYLRW 59

Query: 106 --DAFTRAWLLAARRALKPNGTLFVIGSYHNIFRVGALMQDLGFWILNDIIWRK 157
                   W     R LKP G++++   +     +  LM+D  F ILN IIW K
Sbjct: 60  LDRCLAEFW-----RVLKPAGSIYLFCGHRLAADIEILMRD-RFSILNHIIWAK 107