Pairwise Alignments

Query, 365 a.a., HTH-type transcriptional regulator DegA from Xanthobacter sp. DMC5

Subject, 365 a.a., Ribose operon repressor from Variovorax sp. SCN45

 Score =  158 bits (399), Expect = 2e-43
 Identities = 109/333 (32%), Positives = 165/333 (49%), Gaps = 5/333 (1%)

Query: 27  TLQGLARELGLSTATISLALRDSPMVAEATRLKVQEAARARGYVANRGAAALRTARTNIV 86
           T++ +A +  +S  T+S  + D+  V+   R +V+ A R  GYV N  A +L++  T+ +
Sbjct: 3   TIKDVALQAEVSVTTVSHVVNDTRHVSAKVRERVELAIRELGYVPNAMARSLKSNTTSTL 62

Query: 87  ALGLHDIVNPSFTELLAAVEDALSEAGKTVLLGVSQEDVARQTRTLGTLAEYRPDAFLVS 146
            + + +  NP F E++  VED    AG T++L  + ++  RQ+  L  LAE R D  +V 
Sbjct: 63  GMLIPNSSNPYFAEIVRIVEDRCFGAGYTLVLCNTDDEPHRQSVYLQVLAERRIDGLIVV 122

Query: 147 PAAHSRVEDL-KALASTGIAVVQVTREIEGSGFDFAGSDDVTGVALGVAHLVALGHRRIG 205
                  + L K L    +  V V REI     D   +  + G  L V HL++LGH+RI 
Sbjct: 123 LTGTGDDDALVKQLHGLRVPTVLVDREIADPACDLVETAHMQGGLLAVRHLLSLGHKRIA 182

Query: 206 MIGGFGAISTGRKRFAGYKAGLAAAGIPLD----PTLVMEGPGLRAEGRKAMARLLALDE 261
            IGG   +    +R  G++  LA AG   D      L+  G      G +AM  +L  + 
Sbjct: 183 CIGGQAGVMPSEQRIEGWRMALAEAGATPDIANGDALLWRGGFTSQGGYEAMHAILRTER 242

Query: 262 PPTAAVCFNDLSAFGALMELQAAGLTAGRDFSLVGYDDIEEARVWHPPLTTVHTFIPEYG 321
            P+A    NDL A GAL     +G+    D S+VG+DDIE +    PPLTTV       G
Sbjct: 243 KPSAVFVCNDLMAIGALRAAHESGVRVPDDLSIVGFDDIELSAYTSPPLTTVAQPKERIG 302

Query: 322 RAAATLALKRIADPGRPVERAVMTPQLVVRAST 354
             A  + L+++    R   + V+ P+L VRAST
Sbjct: 303 AMAVDMLLEQMGGKRRDARKVVLQPELRVRAST 335