Pairwise Alignments

Query, 365 a.a., HTH-type transcriptional regulator DegA from Xanthobacter sp. DMC5

Subject, 340 a.a., DNA-binding transcriptional repressor from Pseudomonas putida KT2440

 Score =  162 bits (409), Expect = 2e-44
 Identities = 110/329 (33%), Positives = 168/329 (51%), Gaps = 3/329 (0%)

Query: 27  TLQGLARELGLSTATISLALRDSPMVAEATRLKVQEAARARGYVANRGAAALRTARTNIV 86
           T++ +A   G+S  T+S  L  +  V+E  RLKV+ A     YV +  A +L+   T  +
Sbjct: 3   TIKDVAALAGISYTTVSHVLNKTRPVSEQVRLKVEAAIIELDYVPSAVARSLKARSTATI 62

Query: 87  ALGLHDIVNPSFTELLAAVEDALSEAGKTVLLGVSQEDVARQTRTLGTLAEYRPDAFLVS 146
            L + + VNP F EL   +EDA    G  V+L  S ++  +Q   L  L E R D  +V+
Sbjct: 63  GLLVPNSVNPYFAELARGIEDACERNGYCVILCNSDDNPQKQRSYLRVLLEKRIDGLVVA 122

Query: 147 PAAHSRVEDLKALASTGIAVVQVTREIEGSGFDFAGSDDVTGVALGVAHLVALGHRRIGM 206
                  + L++LAS    +V V RE+EG   D    D   G  L   HL+ LGHR +  
Sbjct: 123 SVGQDD-DLLQSLASVRTPMVIVDRELEGVDADLVRIDHEQGAYLATRHLLELGHRDVAY 181

Query: 207 IGGFGAISTGRKRFAGYKAGLAAAGIPLDPTLVMEGPGLRAEGRKAMARLLALDEPPTAA 266
           IGG       + R +G++  +A AG P+  + V+        G  A A++L   + P+A 
Sbjct: 182 IGGPAETGVTQLRLSGFRRAMAEAGAPVPGSRVLHCDFTSPGGHAAAAQVLE-GKRPSAI 240

Query: 267 VCFNDLSAFGALMELQAAGLTAGRDFSLVGYDDIEEARVWHPPLTTVHTFIPEYGRAAAT 326
              ND+  FG L       ++   + S++G+DDIE +R  +P LTTV   I E G +AA+
Sbjct: 241 FAGNDMIGFGVLRAAAERNISVPGELSVIGFDDIELSRYVYPSLTTVGQSIRELGESAAS 300

Query: 327 LALKRIADPGR-PVERAVMTPQLVVRAST 354
           L L RIA P +   E+ ++ P++V+R ST
Sbjct: 301 LLLTRIATPRQGAAEQRIVAPRIVLREST 329