Pairwise Alignments

Query, 645 a.a., Acetoin catabolism regulatory protein from Xanthobacter sp. DMC5

Subject, 591 a.a., putative sigma-54 dependent transcriptional regulator from Pseudomonas putida KT2440

 Score =  331 bits (849), Expect = 5e-95
 Identities = 230/607 (37%), Positives = 314/607 (51%), Gaps = 44/607 (7%)

Query: 42  SWTRCAERGLPVGGRLKAEPLTQGELSIRRERYEALRRRCRPEL--EALHLSASAAGGIV 99
           SW RC   GL        + L++ ELS   ER + L R  R E+     HL  +A+  +V
Sbjct: 24  SWDRCRAHGLQPQHAPDFDCLSRAELSALLERRQNLLRLTREEVLPHYAHLLGNASY-LV 82

Query: 100 ILTDPTGLVLDTVGSADFADRAAQVALRPGVSWSEADSGTNAIGTALIERRGIEVRGAEH 159
           +L D +G +LD+ GS  F +         G  W E   GTNA+GT LI    + V   EH
Sbjct: 83  MLADASGCLLDSWGSRRFIEPRQHHGFSAGAHWHERGVGTNALGTTLICAEAVHVGQDEH 142

Query: 160 YAEPHGILTCAAAPIHDPFGELVGLLDLSGPAAVPHHHALALVELAVGQVEHRLFEGAFP 219
           +   +  ++ AAAP+ D   +LVG LD++    +P    L LV +    +E+RL      
Sbjct: 143 FLRQNRYMSSAAAPLFDAARQLVGALDVASDGYLPASQTLGLVRMMGQSLENRLILAEHA 202

Query: 220 GRDV-VRFHADPSFLGTAREGVLVFEDH-RLVAANRPALSLLGLGWDALGARRFSEL-FE 276
            +   + F++    L +   G+LVF++  +++AAN  A SLLG+        +  +L  +
Sbjct: 203 DQHAQLIFNSASDNLDSPWAGLLVFDERGQVLAANHRADSLLGVNPLQQNIEQLFQLPLQ 262

Query: 277 GSLGRPGDARRARTPNGPVMLRLERQAPAPVRMAAVPAVAPAPAPAPAGPSFDSETEQAL 336
             L  P     A    G      +   P                  P   S +   E+AL
Sbjct: 263 QLLSHPRQQPFALQATGRNRFHCQWHPPRETTRR------------PEAGSAEPRLEKAL 310

Query: 337 GRAIRLMNAGVPVLIQGETGSGKEVFARQIHARGPRADRTFAAVNCAALPEGLIESELFG 396
            +A  L+   +PVL++GETG GKEVF   +H    RA +   AVNCAA+P  L+ESELFG
Sbjct: 311 IQAGLLLEKDIPVLVEGETGVGKEVFVDALHRASSRARQPLVAVNCAAIPAELVESELFG 370

Query: 397 YEDGAFTGARRAGFKGLFREADGGVLFLDEIGDMPLGLQSRLLRVLQEREVTPLGGGKAV 456
           Y+ GAFTGA   G  GL R+AD G+LFLDEIGDMPL  Q+RLLRVLQ R + PLG G+ V
Sbjct: 371 YDKGAFTGAHHKGNPGLIRKADHGILFLDEIGDMPLPTQARLLRVLQSRSIQPLGSGEPV 430

Query: 457 KVDFALVCASHRDLKMLVEQGSFRADLYFRIAQYTVTLPPLRSLADREALVERLWRDMAG 516
            VD  +V AS+R+L   V  G FR DLY+RIA  T+ LPPLR  ADR  L+E++      
Sbjct: 431 PVDIRVVSASNRNLADEVRAGRFRQDLYYRIAGLTLVLPPLRERADRRQLIEQVHARYRE 490

Query: 517 PGADAPLLSPACREALARHTWPGNFRQLTGVLKVLLALAEPGETVGPEALPADISAADLR 576
           PG  A  L PA  +   +H WPGN R+L  VL+V LALA  G  VG E LPA    A+ +
Sbjct: 491 PGQPA-RLPPAIIDLFDQHPWPGNLRELVSVLQVALALAANG-PVGVEHLPAGF-LAESK 547

Query: 577 SPAQPAAASTLPASQAGDPAPGLSGDLGSVTRAAMDAALKECDGNISRAARRLGIHRSTL 636
           +P   A   T               DL S+        +++ +GN+S  ARRLGI R+TL
Sbjct: 548 TPVPIATEET---------------DLQSL--------VEQANGNLSAVARRLGISRTTL 584

Query: 637 HRHLASR 643
           ++ L  R
Sbjct: 585 YKRLRGR 591