Pairwise Alignments

Query, 645 a.a., Acetoin catabolism regulatory protein from Xanthobacter sp. DMC5

Subject, 671 a.a., sigma-54 dependent transcriptional regulator from Pseudomonas putida KT2440

 Score =  359 bits (922), Expect = e-103
 Identities = 251/657 (38%), Positives = 349/657 (53%), Gaps = 49/657 (7%)

Query: 26  SGAPGAEQALALPIIRSWTRCAERGLPVGGRLKAEP-LTQGELSIRRERYEALRRRCRPE 84
           +G  G++ ++A    RSW RC E        ++A   L  G L   RER   + +    E
Sbjct: 21  AGEGGSDPSIA----RSWLRCLEDYHLDPAVIEAPVVLEHGRLLESRERLHQVLQIADHE 76

Query: 85  LEALHLSASAAGGIVILTDPTGLVLDTVGSADFADRAAQVALRPGVSWSEADSGTNAIGT 144
           + +LH   S AG  V+LTD  G++L+ V +        +  L  G  WSEA  GTN IGT
Sbjct: 77  MNSLHQQLSGAGHAVLLTDARGVILNCVSAPAERRSFERAGLWLGADWSEAREGTNGIGT 136

Query: 145 ALIERRGIEVRGAEHYAEPHGILTCAAAPIHDPFGELVGLLDLSGP----AAVPHHHALA 200
            L+ER+ + +   EH+   H  LTC+A+P+ DP G+L+ +LD+S      +     H +A
Sbjct: 137 CLVERQALTIHQNEHFRGRHTGLTCSASPVFDPHGDLLAVLDVSSARPDVSRQSQFHTMA 196

Query: 201 LVELAVGQVEHRLFEGAFPGRDVVRFHADPSFLGTAREGVLVFE-DHRLVAANRPALSLL 259
           LV L+   +E   F   F  + ++RFH     +G   EG+L F+ D R+ AAN+ AL+LL
Sbjct: 197 LVNLSAKMIESCYFLRHFEQQWLLRFHLQAESVGLFSEGLLAFDGDGRICAANQSALNLL 256

Query: 260 G------LG--WDALGARRFSELFEGSLGRPGDARRARTPNG-PVMLRLERQAPAPVRMA 310
           G      LG   +   A    E+F  +          RT +G  V   L  QA APV   
Sbjct: 257 GTVRGGVLGKPLECFFACSHDEMFSRATPGGSAVWPLRTLDGRQVFASLRGQARAPVW-- 314

Query: 311 AVPAVAPAPAPA--PAGPSFDSETEQALGRAIRLMNAGVPVLIQGETGSGKEVFARQIHA 368
           +VPA  P PA    P     D   +    R++R+    VP+L++GETG GKE FA+ +H 
Sbjct: 315 SVPAAQPRPAGEVEPLVCLLDPALQNDFRRSVRVFERDVPLLLRGETGCGKEAFAQAVHQ 374

Query: 369 RGPRADRTFAAVNCAALPEGLIESELFGYEDGAFTGARRAGFKGLFREADGGVLFLDEIG 428
              R  + F A+NCA++PE LIESELFGY  G+FTGAR+ G +G   +ADGG L LDEIG
Sbjct: 375 ASERRGKPFVAINCASIPESLIESELFGYRGGSFTGARKEGMRGKLLQADGGTLLLDEIG 434

Query: 429 DMPLGLQSRLLRVLQEREVTPLGGGKAVKVDFALVCASHRDLKMLVEQGSFRADLYFRIA 488
           DMPL LQ+RLLRVL+ER+V P+ GG+   VD  +V A+HRDL   VEQGSFR DLY+R+ 
Sbjct: 435 DMPLALQTRLLRVLEERQVVPI-GGEPQAVDVRIVSATHRDLLERVEQGSFREDLYYRLN 493

Query: 489 QYTVTLPPLRSLADREALVERLWR-DMAGPGADAPLLSPACREALARHTWPGNFRQLTGV 547
              V LP +R  +D+  L++ L R +  G   D   + P  R+AL    WPGN RQ+  V
Sbjct: 494 GLEVALPAVRERSDKAQLLDFLLRQETQGQWID---IEPRARQALLAFNWPGNVRQMRNV 550

Query: 548 LKVLLALAEPGETVGPEALPADI-SAADLRSPAQPAAAS---------TLPASQAGDPAP 597
           L+ L+AL E       + LPA I ++  L    +PA  S          L   QA     
Sbjct: 551 LRTLVALCEDARITFAD-LPAVIRTSPPLAGVGEPAKMSDQEMEGEGVALVRGQARSHRS 609

Query: 598 GLSGDL---GSVTRAAMDA---ALKEC----DGNISRAARRLGIHRSTLHRHLASRG 644
           G + ++    + T   +DA   ALKE       +++R A  LGI R+TL+R L   G
Sbjct: 610 GGAAEIEGESAGTEVLLDAERQALKEVLEAKHWHLTRVAEHLGISRNTLYRKLRKHG 666