Pairwise Alignments

Query, 839 a.a., Sensor histidine kinase RcsC from Xanthobacter sp. DMC5

Subject, 1329 a.a., PAS domain S-box from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  127 bits (320), Expect = 3e-33
 Identities = 109/353 (30%), Positives = 171/353 (48%), Gaps = 31/353 (8%)

Query: 485 AVAVFGADGRLNLYNQAFLALWSLDAQAMGDKPHVDAVAAM--------CRPLYGETAAF 536
           AVA+F  + R   Y+  +L  + L+ + +  K H +    +         R L GE  + 
Sbjct: 569 AVAMFDKEIRYIAYSNRWLEEYQLEGKDLYGKSHYEVFGTISEEWKAIHARCLKGEVISN 628

Query: 537 SRIRQAVTAIGPRDATTLRIERPDGRVLDGATQPLPDGGTMVTFRDVTDSVKVERALTER 596
              R      G      LR E       DG+      GG M+  +D+T+S      L + 
Sbjct: 629 EEDRWRPD--GWDHDQFLRWEVRPWHHYDGSI-----GGIMMLTQDITESCLQREELKKA 681

Query: 597 AEALEAADKLKNAFVGHVSYHLRTPLNTLMGYADMLREGLAGPLNDRQRDYLDHMRQSSD 656
               E A K K+ F+ ++S+ +RTPLN ++G+ D++   L   L++ Q  YL  + QS +
Sbjct: 682 KILAEQASKAKSEFLANMSHEIRTPLNGVIGFTDLV---LKTDLSETQAQYLSIVNQSGN 738

Query: 657 LLRALIDDILDLATIDAGAMELDLAEVDVRELVLSVAEAVRDSVDEARLSLAVNIDPAAG 716
            L  +I+DILD + I+AG +ELD+   D+ EL    ++ +   V +  L + +NI P   
Sbjct: 739 ALLNIINDILDFSKIEAGKLELDIDRCDLYELTEQTSDIITYEVHKKGLEMLLNIHPDIP 798

Query: 717 VFV-ADARRLRQILFNLLSNAIAVSPEGG-TVTLGAIRRDGA-----LVFTVRDEGPGVP 769
            F+  D+ R++QI+ NLL NA   + EG   + L  I +D A     + F+VRD G G+ 
Sbjct: 799 RFIWVDSVRVKQIMVNLLGNASKFTEEGEIELQLYPIDKDEASREMVIRFSVRDTGIGIK 858

Query: 770 AEVKETLFDRF--ESRSAGPRHRGVGLGLAIVRSFVSL-HGG---SVTVGPAS 816
           AE +  +F+ F  E  S   ++ G GLGL I    + L H G     TVG  S
Sbjct: 859 AEKQTKIFEAFSQEDVSTTKKYGGTGLGLTISNRLLQLMHSGLQLHSTVGKGS 911