Pairwise Alignments

Query, 1172 a.a., RecBCD enzyme subunit RecB from Xanthobacter sp. DMC5

Subject, 720 a.a., DNA helicase II from Dickeya dianthicola ME23

 Score = 66.2 bits (160), Expect = 9e-15
 Identities = 133/552 (24%), Positives = 214/552 (38%), Gaps = 117/552 (21%)

Query: 361 RRYEAEKAA---RGLLDFDDLITKAAALLAEQPTFVQFKLDQGIDHILVDEAQDTSPEQW 417
           R Y+A + A    GL+DF +L+ +A  L   +P  +Q   D+  ++ILVDE QDT+  Q+
Sbjct: 172 RIYQAYQEACDRAGLVDFAELLLRAHELWLNKPHILQHYRDR-FNNILVDEFQDTNRIQY 230

Query: 418 KVVEGLTSDFFSGEGARAGVTRTIFVVGDEKQSIFSFQGADPRAFGAMRSTFERKVGAEG 477
             +  L     +G+GA+      + +VGD+ QSI+ ++GA           F        
Sbjct: 231 AWIRLL-----AGDGAK------VMIVGDDDQSIYGWRGAQVENIQHFLRDF------SD 273

Query: 478 FRRVELPHSFRSAPGVLEAVDAIFKSEVAHAGLTLDGVGPVHAAIRADAPALVEIWPTTV 537
              + L  ++RS   +L A +A+    +AH G   D +G               +W   +
Sbjct: 274 VTTIRLEQNYRSTANILNAANAL----IAHNG---DRLGK-------------NLWTDGI 313

Query: 538 PEPHPEPDNWRRPLDEVPSDDPVSRLAARIAGFIQAGIANGLAIPSRNGRPMRAGDVLVL 597
                EP +     +E+   D    + +RI  + +AG A            +    +L  
Sbjct: 314 ---DGEPISLYCAFNEL---DEARFVVSRIKVWQEAGGA------------LSECAILYR 355

Query: 598 VRRRGRVFEAVIRALKELKDPRVQVAGA---DRLVVPEHIAALDLMALGDALLSPHDDLS 654
              + RV E    AL +   P     G    +R  + + ++ L LMA      + +DD +
Sbjct: 356 SNAQSRVLE---EALLQQSLPYRIYGGMRFFERQEIKDALSYLRLMA------NRNDDAA 406

Query: 655 LASVLKSPLFGFTD---DDLMALCPQRKGTL--ASVLATSDDTRHRAAAARLAGWKGEAE 709
              V+ +P  G  D   D +      R+ TL  A+     +      AAA L  +    +
Sbjct: 407 FERVVNTPTRGIGDRTLDVVRQTARDRQLTLWQATRALLQEKVLAGRAAAALQRFLELVD 466

Query: 710 GLR------PFDFYGRVLGRDGGRRAML----ARLGPEAADVLDEFMALARTYE-GAEPA 758
            L       P       + RD G  +M        G    + L+E +   R +    E  
Sbjct: 467 ALASDTADLPLHVQTDRVIRDSGLWSMYEQEKGEKGQARVENLEELVTATRQFSYQDEDQ 526

Query: 759 SLAGFLAFLRRGGAET-KRDMESGRDEVRVMTAHGAKGLEAPLVILADTVDMPRPRIAGG 817
            L    AFL     E  +   ++ +D V++MT H AKGLE P V +    +   P     
Sbjct: 527 DLLPLQAFLSHAALEAGEGQADAYQDAVQLMTLHSAKGLEFPQVFVVGMEEGMFP----S 582

Query: 818 LLTLPGEGVPVLAPRKAEDPEVLAAARATAAARELEEYRRLFYVALTRAEDALVICGAET 877
            ++L   G                          LEE RRL YV +TRA   L +  AE+
Sbjct: 583 QMSLDEGG-------------------------RLEEERRLAYVGVTRAMQKLTLTYAES 617

Query: 878 RAPARDKPHARP 889
           R     + + RP
Sbjct: 618 RRLYGKETYHRP 629



 Score = 41.6 bits (96), Expect = 2e-07
 Identities = 24/53 (45%), Positives = 32/53 (60%), Gaps = 1/53 (1%)

Query: 30 VSANAGSGKTHVLARRVIRLL-LAGTPPGRILCLTYTKAAAANMANRVLAILG 81
          V A AGSGKT VL  R+  LL +    P  I+ +T+T  AAA M +R+  +LG
Sbjct: 27 VLAGAGSGKTRVLVHRIAWLLTVENCSPYSIMAVTFTNKAAAEMRHRIDQLLG 79