Pairwise Alignments

Query, 1172 a.a., RecBCD enzyme subunit RecB from Xanthobacter sp. DMC5

Subject, 723 a.a., DNA helicase II from Alteromonas macleodii MIT1002

 Score = 68.6 bits (166), Expect = 2e-15
 Identities = 128/540 (23%), Positives = 197/540 (36%), Gaps = 120/540 (22%)

Query: 371 GLLDFDDLITKAAALLAEQPTFVQFKLDQGIDHILVDEAQDTSPEQWKVVEGLTSDFFSG 430
           GL+DF +L+ +A  L A+ P  V     +    +LVDE QDT+  Q+  +  L S     
Sbjct: 185 GLVDFAELLLRAHELWAKNPE-VLAHYQRRFRAVLVDEFQDTNNIQYAWLRMLCS----- 238

Query: 431 EGARAGVTRTIFVVGDEKQSIFSFQGADPRAFGAMRSTFERKVGAEGFRRVELPHSFRSA 490
                G    I +VGD+ QSI+ ++GA+          F           + L  ++RS 
Sbjct: 239 -----GGNNNIMIVGDDDQSIYGWRGANVDNIQHFLKDFNEPT------TIRLEQNYRST 287

Query: 491 PGVLEAVDAIFKSEVAHAGLTLDGVGPVHAAIRADAPALVEIWPTTVPEPHPEPDNWRRP 550
             +L+A + +  +     G                     E+W                 
Sbjct: 288 GNILKAANTVIDNNTGRLG--------------------KELW----------------- 310

Query: 551 LDEVPSDDPVSRLAARIAGFIQAGIANGLAIPSRN----GRPMRAGDVLVLVRRRGRVFE 606
                ++D    L +  AGF +   A  +    ++    G  +    +L     + RV E
Sbjct: 311 -----TEDAQGELISVYAGFNELDEARFIVSKIKDWLNQGNALTDTAILYRNNAQSRVLE 365

Query: 607 AVIRALKELKDPRVQVAGADRLVVPEHIAALDLMALGDALLSPHDDLSLASVLKSPLFGF 666
             +      +    ++ G  R    + I   D +     +  PHDD +   V+ +P  G 
Sbjct: 366 EALLH----EGLAYRIYGGLRFFERQEIK--DALGYMRMVSHPHDDAAFERVVNTPSRGI 419

Query: 667 TDDDLMALCPQRK------GTLASVLATSDDTRHRAAAAR----LAGWKGEAEGL-RPFD 715
            +  L  +    +           +L      + RA  A     L   + E   L  P D
Sbjct: 420 GEKTLSQVRDTARMHNCSMWQACQLLINEGGFKGRALNAMQSFVLLITELEQSTLDEPLD 479

Query: 716 FYGRVLGRDGGRRAML-ARLGPEAADVLD---EFMALARTY----EGAEPASLAGFLAFL 767
                  R  G  AM  A  G +A   L+   E +   +T+    E  E + LA FLA  
Sbjct: 480 QQADKAIRQSGLYAMYQAERGEKAQARLENLEELVTACKTFIVPEEAEEMSPLAAFLAHA 539

Query: 768 RRGGAETKRDMESGRDEVRVMTAHGAKGLEAPLVILADTVDMPRPRIAGGLLTLPGEGVP 827
                ET+ D +  +D V++MT H AKGLE PLV LA                   EG  
Sbjct: 540 SLEAGETQADKD--QDAVQMMTIHTAKGLEFPLVFLAGV----------------EEG-- 579

Query: 828 VLAPRKAEDPEVLAAARATAAARELEEYRRLFYVALTRAEDALVICGAET-RAPARDKPH 886
            + P +  + E             +EE RRL YV +TRA   L I  AE+ R   +DK H
Sbjct: 580 -MFPSQMTNDE----------PGRMEEERRLCYVGMTRAMQKLYITYAESRRLYGQDKYH 628



 Score = 45.8 bits (107), Expect = 1e-08
 Identities = 29/72 (40%), Positives = 41/72 (56%), Gaps = 2/72 (2%)

Query: 13 EATRRQSEA-SHPAVSAWVSANAGSGKTHVLARRVIRLL-LAGTPPGRILCLTYTKAAAA 70
          E   +Q EA + P  +A V A AGSGKT VL  R+  L+ +    P  IL +T+T  AA 
Sbjct: 9  ELNDKQREAVAAPLSNALVLAGAGSGKTRVLVHRIAWLMEVENIAPFSILAVTFTNKAAK 68

Query: 71 NMANRVLAILGR 82
           M  R+ +++GR
Sbjct: 69 EMRGRIESLMGR 80