Pairwise Alignments

Query, 1172 a.a., RecBCD enzyme subunit RecB from Xanthobacter sp. DMC5

Subject, 671 a.a., ATP-dependent DNA helicase rep from Alteromonas macleodii MIT1002

 Score = 67.0 bits (162), Expect = 5e-15
 Identities = 48/147 (32%), Positives = 76/147 (51%), Gaps = 18/147 (12%)

Query: 357 AEACRRYEAEKAARGLLDFDDLITKAAALLAEQPTFVQFKLDQGIDHILVDEAQDTSPEQ 416
           AEA +RY+    A   LDFDDLI     LL      ++ K    I ++LVDE QDT+  Q
Sbjct: 165 AEAYKRYQDNLKAYNALDFDDLILLPTLLLKSSEA-IRAKWQSKIRYLLVDEYQDTNTSQ 223

Query: 417 WKVVEGLTSDFFSGEGARAGVTRTIFVVGDEKQSIFSFQGADPRAFGAMRSTFERKVGAE 476
           +++V+ L        G RA  T    VVGD+ QSI+S++GA P+    ++  F R     
Sbjct: 224 YELVKLLV-------GERARFT----VVGDDDQSIYSWRGAKPQNLHLLQQDFPR----- 267

Query: 477 GFRRVELPHSFRSAPGVLEAVDAIFKS 503
               ++L  ++RS+  +L   + + ++
Sbjct: 268 -LNVIKLQQNYRSSGRILHCANILIQN 293



 Score = 37.7 bits (86), Expect = 3e-06
 Identities = 22/54 (40%), Positives = 29/54 (53%), Gaps = 1/54 (1%)

Query: 30 VSANAGSGKTHVLARRVIRLLLAGTPPGR-ILCLTYTKAAAANMANRVLAILGR 82
          V A AGSGKT V+  ++  L+     P R I  +T+T  AA  M  RV   LG+
Sbjct: 20 VLAGAGSGKTRVITNKIAHLVRNCDMPARYIAAVTFTNKAAREMKERVAQTLGK 73



 Score = 36.6 bits (83), Expect = 7e-06
 Identities = 32/114 (28%), Positives = 49/114 (42%), Gaps = 30/114 (26%)

Query: 783 DEVRVMTAHGAKGLEAPLVILADTVDMPRPRIAGGLLTLPGEGVPVLAPRKAEDPEVLAA 842
           D+V++MT H +KGLE P+V L    +        GLL           P ++   E    
Sbjct: 551 DQVQLMTLHASKGLEFPIVFLVGMEE--------GLL-----------PHQSSVDE---- 587

Query: 843 ARATAAARELEEYRRLFYVALTRAEDALVICGAETRAPARDKPHARPEGCWYDL 896
                    +EE RRL YV +TRA+  L+   A+ R    +  +  P    ++L
Sbjct: 588 -------DNVEEERRLAYVGITRAQRELIFSLAKERRQFGEVINPEPSRFLFEL 634