Pairwise Alignments

Query, 345 a.a., hypothetical protein from Xanthobacter sp. DMC5

Subject, 363 a.a., ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score = 58.2 bits (139), Expect = 3e-13
 Identities = 72/326 (22%), Positives = 127/326 (38%), Gaps = 58/326 (17%)

Query: 45  NPAAKLLGITINQDSAPDAWPVLKTQAATGKPIWDVIDAPTTICVRGGDQGMVEKLDFSK 104
           NP  KL+    + + A      L+ +  TG   +DV+        +  + G+ + LD S+
Sbjct: 46  NPTIKLVYDIFDTNEA------LEAKLLTGNAGYDVVVPSNVFLAKQIEAGVFQPLDRSQ 99

Query: 105 IPTAASMPAQYK---------TPYSVAYEFYSSVLAYNKKKF-ASKAPQTWADFWDV--- 151
           +     +  +             ++V Y + + ++ +N  K  A+       D WD+   
Sbjct: 100 LQNWKHLDPKLMKLIEANDPGNKFAVPYMYGTILIGFNPDKVKAALGVNAPVDSWDLIFK 159

Query: 152 -----KAFPGTRALRNHPQATMEAALLADGVPADKLYPLDVDRAFKKLEQIKPHITVWWT 206
                K      AL + P   +  AL   G+  +   P D  +A   L +I+P++T + +
Sbjct: 160 EENISKLKQCGVALLDSPSEILPLALQHLGLDPNSSNPKDYAKAEALLLKIRPYVTYFHS 219

Query: 207 SGAQSAQLLADGEVDMEMAWNGRVAAVM-----------------KEGAPVSFTFNQGLL 249
           S   +   +A+G++ + + ++G  +                    KEGAP+ F       
Sbjct: 220 SKYMAD--IANGDICVAVGYSGSFSQAANRARDAKNGVTVDMRLPKEGAPIWFDM----- 272

Query: 250 QETSLCIVKGAPNLETAYKFVNAAMTPDIQANFPAYIDYGPGNPAAYATGKISPERATQM 309
               L I KGA N + AY F+N  + P + A    ++ Y   NP   AT ++ P      
Sbjct: 273 ----LAIPKGAKNPQDAYTFINYLLQPQVIAPISDFVGY--PNPNKDATEQVDPSIRNNP 326

Query: 310 PSAPENAAKQVLVSQAWWASPAGEDA 335
              P  AA   L    +   P G DA
Sbjct: 327 NLYPTEAAMATL----YTLKPLGRDA 348