Pairwise Alignments

Query, 345 a.a., hypothetical protein from Xanthobacter sp. DMC5

Subject, 367 a.a., putrescine-binding periplasmic protein from Pseudomonas putida KT2440

 Score = 70.5 bits (171), Expect = 6e-17
 Identities = 84/332 (25%), Positives = 137/332 (41%), Gaps = 53/332 (15%)

Query: 8   PVMTAALALSVATASAEQITF-VSQGGAYQEAQTKAILNPAAKLLGITINQDSAPDAWPV 66
           P + A L      A AEQ T  V     Y   QT   L    K  G+ +  D   D    
Sbjct: 10  PFIAATLFAGALHAQAEQRTLRVYNWFDYITPQT---LTAFQKDSGVKLVYDIF-DTNEA 65

Query: 67  LKTQAATGKPIWDVIDAPTTICVRGGDQGMVEKLDFSKIPTAASM-PAQYK--------T 117
           L+ +  TG   +DV+        +  + G+ + LD SK+P    + PA  K         
Sbjct: 66  LEAKLLTGNSGYDVVVPSNVFLAKQIEAGVFQPLDRSKLPNWQHLDPALMKLIEANDPGN 125

Query: 118 PYSVAYEFYSSVLAYNKKKF-ASKAPQTWADFWDV--------KAFPGTRALRNHPQATM 168
            ++V Y + + ++ +N  K  A+       D WD+        K      AL + P   +
Sbjct: 126 KFAVPYMYGTVLIGFNPAKVKAALGDNAPVDSWDLIFKEENIAKLKQCGVALLDSPSEIL 185

Query: 169 EAALLADGVPADKLYPLDVDRAFKKLEQIKPHITVWWTSGAQSAQLLADGEVDMEMAWNG 228
             AL   G+P +   P D  +A + + +I+PHIT + +S   +   +A+G++ + + ++G
Sbjct: 186 PLALQYLGLPPNSDKPADYKKAEELMLKIRPHITYFHSSKYMAD--IANGDICVAVGYSG 243

Query: 229 RVAAVM-----------------KEGAPVSFTFNQGLLQETSLCIVKGAPNLETAYKFVN 271
             +                    KEGAP+ F           L I KGA N E A+ F+N
Sbjct: 244 SFSQAANRAREANNGVVVDMRLPKEGAPIWFDM---------LAIPKGAANPEDAHTFIN 294

Query: 272 AAMTPDIQANFPAYIDYGPGNPAAYATGKISP 303
             + P++ A    ++ Y   NP   AT K++P
Sbjct: 295 YLLRPEVIAPISDFVGY--PNPNKDATDKVNP 324