Pairwise Alignments

Query, 345 a.a., hypothetical protein from Xanthobacter sp. DMC5

Subject, 364 a.a., spermidine/putrescine ABC transporter - periplasmic subunit from Pseudomonas putida KT2440

 Score = 56.2 bits (134), Expect = 1e-12
 Identities = 66/274 (24%), Positives = 116/274 (42%), Gaps = 28/274 (10%)

Query: 49  KLLGITINQDSAPDAWPVLKTQAATGKPIWDVIDAPTTICVRGGDQGMVEKLDFSKIPTA 108
           K  GI   QD   D+   L+ +   G   +DV+        +    G  +KLD + +P  
Sbjct: 47  KATGIKPVQDVF-DSNETLEGKLLAGNTGYDVVVPSNHFLGKQIKAGAFQKLDKNLLPNY 105

Query: 109 ASM-PAQYK--------TPYSVAYEFYSSVLAYNKKKFASKAPQTWADFWDVKAFPGTR- 158
           +++ PA  K          Y+V Y + ++ + YN  K  +       D W V   P    
Sbjct: 106 SNLDPALMKRLEKNDPGNQYAVPYLWGTNGIGYNVDKVKAALGVDTIDSWAVLFEPENMK 165

Query: 159 -------ALRNHPQATMEAALLADGVPADKLYPLDVDRAFKKLEQIKPHITVWWTSGAQS 211
                  A  +     + A L   G+  +   P D  +A +KL  ++P++T + +S  + 
Sbjct: 166 KLSKCGVAFLDSADEMLPAVLNYMGLNPNSTDPKDYAKAEQKLLAVRPYVTYFHSS--KY 223

Query: 212 AQLLADGEVDMEMAWNGRV------AAVMKEGAPVSFTFNQ--GLLQETSLCIVKGAPNL 263
              LA+G++ +   ++G V      A   K+G  +++   +  G L    L I K A N+
Sbjct: 224 ITDLANGDICVAAGFSGDVFQAKARAEEAKKGVNLAYAIPKEGGNLWFDVLAIPKDAKNV 283

Query: 264 ETAYKFVNAAMTPDIQANFPAYIDYGPGNPAAYA 297
           + A+ F+N  + P++ A    Y+ Y   NP A A
Sbjct: 284 KEAHAFINYLLKPEVIAQVSDYVGYANPNPKAGA 317