Pairwise Alignments

Query, 345 a.a., hypothetical protein from Xanthobacter sp. DMC5

Subject, 348 a.a., spermidine/putrescine ABC transporter substrate-binding protein PotD from Escherichia coli ECRC100

 Score = 85.5 bits (210), Expect = 2e-21
 Identities = 60/246 (24%), Positives = 110/246 (44%), Gaps = 14/246 (5%)

Query: 78  WDVIDAPTTICVRGGDQGMVEKLDFSKI-------PTAASMPAQYKTPYSVAYEFYSSVL 130
           +D++   T    +   +GM++K+D SK+       P   + P      YS+ Y + ++ +
Sbjct: 77  YDLVVPSTYYVDKMRKEGMIQKIDKSKLTNFSNLDPDMLNKPFDPNNDYSIPYIWGATAI 136

Query: 131 AYNKKKFASKAPQTWADFWDVKAFPGTRALRNHPQATMEAALLADGVPADKLYPLDVDRA 190
             N      K+  +WAD W  + + G+  L +  +   + AL   G   +   P +++ A
Sbjct: 137 GVNGDAVDPKSVTSWADLWKPE-YKGSLLLTDDAREVFQMALRKLGYSGNTTDPKEIEAA 195

Query: 191 FKKLEQIKPHITVWWTSGAQSAQLLADGEVDMEMAWNGRVAAVMKEGAPVSFTFNQ--GL 248
           + +L+++ P++  +  +    A    +GEV++ M WNG      + G P+   + +  G+
Sbjct: 196 YNELKKLMPNVAAF--NSDNPANPYMEGEVNLGMIWNGSAFVARQAGTPIDVVWPKEGGI 253

Query: 249 LQETSLCIVKGAPNLETAYKFVNAAMTPDIQANFPAYIDYGPGNPAAYATGKISPERATQ 308
               SL I   A N E A K +N  + PD+       I Y   N AA     +SPE A  
Sbjct: 254 FWMDSLAIPANAKNKEGALKLINFLLRPDVAKQVAETIGYPTPNLAARKL--LSPEVAND 311

Query: 309 MPSAPE 314
              +P+
Sbjct: 312 KTLSPD 317