Pairwise Alignments

Query, 290 a.a., hypothetical protein from Xanthobacter sp. DMC5

Subject, 286 a.a., ABC-type spermidine/putrescine transport system, permease component I from Variovorax sp. SCN45

 Score =  163 bits (412), Expect = 5e-45
 Identities = 94/259 (36%), Positives = 142/259 (54%), Gaps = 10/259 (3%)

Query: 23  LLAPSLAVVGCLLIVPLCWLVWQSVR--------QDGAFTLAHYARFFSDAVYWTTFLQT 74
           L  P+L +   LL+VPL      S          + G FTLAHYA  FSD+ Y   F +T
Sbjct: 13  LSGPALVLFTALLLVPLALTAVLSFNVYDPATGPKSGEFTLAHYALVFSDSYYLGIFWRT 72

Query: 75  FRIAFIVTAVTVLLGYPIAYVAAGASRRWSIFILAMVILPFWTSVLVRAYAWLILLQRRG 134
           F ++ +VT + VL+G P AYV +     W   +L +V+ P   SV+VRA+ W +LL   G
Sbjct: 73  FWVSALVTLICVLVGAPEAYVLSRMRNPWRSALLLVVLAPLLVSVVVRAFGWSMLLGPEG 132

Query: 135 LVNSVLTDFGLIQNPLALVNNELGTVIATVHILLPFMVLPLYATMQKIPAELTMAGASLG 194
            VN++L   G+   P+ ++      VIA VH++LPFMV+P++ ++QK+   +  A  SL 
Sbjct: 133 AVNALLRLVGI--GPVKILYTNAAVVIALVHVMLPFMVIPVWTSLQKLDPGVENAALSLN 190

Query: 195 GTPFYVFTRVFLPLSLPGVVAGMVLVFVLTLGFYITPELLGGGRTYMVSMLVSRNIEVYN 254
            TPF    R+ LP  +PG+++G +LVF L    +  P LLGG R  MV+ +V        
Sbjct: 191 ATPFTTLRRIVLPQVMPGILSGSLLVFGLAASSFAIPGLLGGRRLKMVATIVYDEYLSEL 250

Query: 255 EWGAASSISIVLLACVFLV 273
            W   +++++VLL    +V
Sbjct: 251 NWPLGAAVALVLLVANLVV 269