Pairwise Alignments

Query, 264 a.a., hypothetical protein from Xanthobacter sp. DMC5

Subject, 294 a.a., spermidine/putrescine ABC transporter permease from Pseudomonas simiae WCS417

 Score =  111 bits (278), Expect = 2e-29
 Identities = 79/258 (30%), Positives = 137/258 (53%), Gaps = 16/258 (6%)

Query: 10  VAVGLILVWLMVPVLIIVPMSFSGARFLAFPPPSWSLRWYEAYLESAAWMQATRVSLILA 69
           +  GL+ ++L  P+LI+V  SF+ ++ +      WS++WY   L++   M +   SL +A
Sbjct: 11  LVAGLLFIYL--PMLILVIYSFNESKLVTVWG-GWSIKWYVGLLDNTQLMGSVARSLEIA 67

Query: 70  VSSAIIATVLGTAAAYALNLSTSRLVRSLQVVLLL-PLVVPIVITAVGVFLVYANVGLLA 128
             +A+ A  LGT AA+ L   +    R+L   L+  PLV+P VIT + + L++     +A
Sbjct: 68  CYTAVAAVALGTLAAFVLTRISQFKGRTLFGGLVTAPLVMPEVITGLSLLLLFV---AMA 124

Query: 129 TMSG---------LILANVMLGLPFVIISVLTGLRKFDPAQEMVSRSLGMNRLRTFFIVT 179
            M G         + +A+      +V + V   LR+ D + E  +  LG    + FF++T
Sbjct: 125 QMIGWPQERGIVTIWIAHTTFCAAYVAVVVSARLRELDLSIEEAAMDLGARPWKVFFLIT 184

Query: 180 LPQIRPSVISGLLFAFISALDETVVAIFISGGEYQTLTKRMFTALRDEIDPTIAAISTLL 239
           +P I PS+ +G + +F  +LD+ V+A F+SG    TL   +F+A+R  + P I A+++L+
Sbjct: 185 IPMIAPSLAAGGMMSFALSLDDLVLASFVSGPGSTTLPMEVFSAVRLGVKPEINAVASLI 244

Query: 240 TAISFLMVILVSLSARTA 257
                L+  LV   +R A
Sbjct: 245 LLAVSLVTFLVWFFSRRA 262