Pairwise Alignments

Query, 311 a.a., HTH-type transcriptional regulator CdhR from Xanthobacter sp. DMC5

Subject, 334 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  147 bits (371), Expect = 3e-40
 Identities = 100/313 (31%), Positives = 149/313 (47%), Gaps = 12/313 (3%)

Query: 5   ILAYDGISPFMLSTPLAVF----------GEPFLAGGHSVDVCAQAPRLSATGGLVIEAP 54
           +LA+D      ++ PL VF          GEP L    SV      P +++ G  ++  P
Sbjct: 7   VLAFDNAQVLDVTGPLQVFASTNDLARQRGEP-LPYAVSVIAAQSEPVMTSAGLALVAEP 65

Query: 55  HPLSTARAADVVILPGWRNADEPVPEALVAELKAADARGALVVGLCLGAFGLAQAGLLNG 114
            P + A    +VI  GW         ALV  ++        +  +C GAF LA +G+L+G
Sbjct: 66  LPAADAPCDTLVIAGGWGVYGAAEDPALVDWVREKAKHTRRMTSVCTGAFLLAASGMLDG 125

Query: 115 RRATTHWARAQAFAERYPEVRVDAGALFVDEGQMLTSAGIAAGLDCCLHLLARLSGVGEA 174
            R  THW R +  A ++P + V++  +F+ +G + TSAG+ AG+D CL L+    G   A
Sbjct: 126 CRVATHWTRCEELARKFPSLTVESNPIFIQQGAVWTSAGVTAGIDLCLALVEEDLGRAIA 185

Query: 175 NRVARHLVVAPQRAGAQPQIIARPTIATPADQRVTELLETLRAAPSATPALDDLAVRMGM 234
             VARHLVV  +R G Q Q     ++    D R  EL   +    +    +  LA + GM
Sbjct: 186 LEVARHLVVFLKRPGGQSQFSVTLSLQKD-DSRFAELHAWMAENLTLDLNIPTLAAQAGM 244

Query: 235 SRRSLTRHIRARTGGSLGDWLKRARLAQAQDLLASGARGLDAIAQRCGFADAQALRLAFR 294
           S RS  RH RA TG +    ++  R+  A+  LA     +  IA +CGF   + LR +F 
Sbjct: 245 SERSFVRHYRAETGQTPARAVELIRVETARRQLADSTASIKRIAVQCGFGCEETLRRSFL 304

Query: 295 SELGTTPRQWLAR 307
             L  TP+ +  R
Sbjct: 305 RALSVTPQAYRER 317