Pairwise Alignments

Query, 311 a.a., HTH-type transcriptional regulator CdhR from Xanthobacter sp. DMC5

Subject, 323 a.a., Transcriptional regulator, AraC family from Variovorax sp. SCN45

 Score =  134 bits (336), Expect = 4e-36
 Identities = 102/307 (33%), Positives = 147/307 (47%), Gaps = 8/307 (2%)

Query: 3   LAILAYDGISPFMLSTPLAVFGEPFLAGGHSVDVCAQAPRLSATGGLVIEAPHPLSTARA 62
           +A L       F ++ PL+VF      G        +   LS  GG V  +       RA
Sbjct: 5   VAFLLVPEFQLFDMAGPLSVFQVAAEIGRGRRGPAYEVAVLSERGGRVACSAGLEMHTRA 64

Query: 63  -----ADVVILPGWRNADEP--VPEALVAELKAADARGALVVGLCLGAFGLAQAGLLNGR 115
                A  VI+PG   A +P     AL+  L+ A A    V  +C GAF LA+AGLL+GR
Sbjct: 65  WRDSQAGTVIVPGGVGARKPGAATPALMQHLRGALAAKRRVASVCTGAFLLAEAGLLDGR 124

Query: 116 RATTHWARAQAFAERYPEVRVDAGALFVDEGQMLTSAGIAAGLDCCLHLLARLSGVGEAN 175
            ATTHW +A      YP + VDA  +FV +G + +SAGIAAG+D  L ++    G   A 
Sbjct: 125 HATTHWRQAALLQRNYPAITVDADRIFVRDGNVWSSAGIAAGIDLALAMVEADLGADTAG 184

Query: 176 RVARHLVVAPQRAGAQPQIIARPTIATPADQRVTELLETLRAAPSATPALDDLAVRMGMS 235
            VAR +VV  +R G Q Q  A   +A P   R+  +L  +    +A   ++ LA    +S
Sbjct: 185 AVAREMVVYHRRTGGQSQFSALQDLA-PQSGRMRAVLAYIGENLTADLDIERLAEVACVS 243

Query: 236 RRSLTRHIRARTGGSLGDWLKRARLAQAQDLLASGARGLDAIAQRCGFADAQALRLAFRS 295
            R   R  +A TG +    ++R R   A+  +  G   ++A+A+  GF D + +R AF  
Sbjct: 244 PRQFMRAFKAETGQTPAKAVERIRAEVARTHIEGGDSSIEAVARLTGFEDTERMRRAFVR 303

Query: 296 ELGTTPR 302
             G  P+
Sbjct: 304 VYGQPPQ 310