Pairwise Alignments

Query, 311 a.a., HTH-type transcriptional regulator CdhR from Xanthobacter sp. DMC5

Subject, 315 a.a., Transcriptional regulator, AraC family from Variovorax sp. SCN45

 Score =  135 bits (339), Expect = 2e-36
 Identities = 103/315 (32%), Positives = 151/315 (47%), Gaps = 13/315 (4%)

Query: 2   RLAILAYDGISPFMLSTPLAVFGEPFLAGGHSVDVCAQAPRLSATGGLVIEAP-----HP 56
           R+ +L + G     L+  +A F    LA  H          LS TGG V+ +        
Sbjct: 3   RIGVLVFPGFQILDLAA-IAAFE---LANMHLDQPVYCVEMLSETGGPVVSSSGVTVDSK 58

Query: 57  LSTARAADVVILPGWRNADEPVPEALVAELKAADARGALVVGLCLGAFGLAQAGLLNGRR 116
             TA   D +++ G      P  E L   L++       V  +C GAFGLA AGLL+GRR
Sbjct: 59  RYTAAKFDTLVMTGSLTIT-PTSEKLCQILRSGRRSARRVASICTGAFGLADAGLLDGRR 117

Query: 117 ATTHWARAQAFAERYPEVRVDAGALFVDEGQMLTSAGIAAGLDCCLHLLARLSGVGEANR 176
            TTHWA AQ     +P  +V    +F+++  + TSAG+ AG+D  L L+    GV  A  
Sbjct: 118 VTTHWAFAQELQRCHPLAKVQPDRIFINDDSLWTSAGMTAGIDLVLALVEEDLGVDMARL 177

Query: 177 VARHLVVAPQRAGAQPQIIARPTIATPADQRVTELLETLRAAPSATPALDDLAVRMGMSR 236
           +A+ LVV  +RAG Q Q  A   +  P   R+   L   RA      ++++LA    +S 
Sbjct: 178 IAKKLVVYHRRAGGQSQFSALLEL-EPKSDRIQLALAYARAHLREGLSVEELAEVAHLSP 236

Query: 237 RSLTRHIRARTGGSLGDWLKRARLAQAQDLLASGARGLDAIAQRCGFADAQALRLAFRSE 296
           R  +R  +A TG S    ++  R+  A+ L+  G   L  +AQ  GF D + +R AF   
Sbjct: 237 RQFSRAFKAETGQSPAQAVESLRVEAARALIDEGRLALGVVAQEVGFGDPERMRRAFLRT 296

Query: 297 LGTTPR--QWLARQR 309
           LG  P+  + +ARQ+
Sbjct: 297 LGQPPQSVRRVARQQ 311