Pairwise Alignments

Query, 311 a.a., HTH-type transcriptional regulator CdhR from Xanthobacter sp. DMC5

Subject, 306 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

 Score =  102 bits (253), Expect = 1e-26
 Identities = 71/246 (28%), Positives = 118/246 (47%), Gaps = 6/246 (2%)

Query: 63  ADVVILPG-WRNAD---EPVPEALVAELKAADARGALVVGLCLGAFGLAQAGLLNGRRAT 118
           ADV+ILP  W + D   +  P+ L   L+   ARGA++     G F LA++GLL+G+ AT
Sbjct: 55  ADVIILPAYWDDFDNLLQRYPQVL-PWLREQHARGAVLCAEASGVFWLAESGLLDGKEAT 113

Query: 119 THWARAQAFAERYPEVRVDAGALFVDEGQMLTSAGIAAGLDCCLHLLARLSGVGEANRVA 178
           T+W    +FAER+P++R++      D   +  + G  +  D  ++L+ R  G   A  V+
Sbjct: 114 TYWRFFNSFAERFPQIRLNQDKHLTDADNIYCAGGATSACDLYIYLIERFCGANVARAVS 173

Query: 179 RHLVVAPQRAGAQPQIIARPTIATPADQRVTELLETLRAAPSATPALDDLAVRMGMSRRS 238
           R ++   QR    P  +         D  + ++   L    +     +D+A   GMS R+
Sbjct: 174 RDILYEVQR-NYTPGRMGFGGQKLHQDLIILQIQHWLEEHFADKFRFEDVARNHGMSIRN 232

Query: 239 LTRHIRARTGGSLGDWLKRARLAQAQDLLASGARGLDAIAQRCGFADAQALRLAFRSELG 298
             R  +  TG     +L+R R+  A+ LL+S  + +  I+   G+ DA      FR    
Sbjct: 233 FMRRFQGATGDKPLHYLQRLRIETAKGLLSSTRKSIKTISYEVGYDDASFFARLFRQHTE 292

Query: 299 TTPRQW 304
            +P Q+
Sbjct: 293 LSPNQY 298