Pairwise Alignments

Query, 303 a.a., PCP degradation transcriptional activation protein from Xanthobacter sp. DMC5

Subject, 314 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

 Score =  142 bits (357), Expect = 1e-38
 Identities = 106/297 (35%), Positives = 149/297 (50%), Gaps = 13/297 (4%)

Query: 6   LDLNLLVTLEALLAERNVTRAAARLHLSQPAVSAQLARLRDLFDDPLLVPARRGMTPTVK 65
           L L  L TL+ LL  +N++ AA RL +SQ A+S QLA LR+ FDDPLLV   RG   +  
Sbjct: 8   LSLAHLRTLDHLLQLKNLSHAAERLGVSQSALSRQLAHLREAFDDPLLVRQGRGYVLSEH 67

Query: 66  AVELAGPLRAALDQLRATLEARDFDPATADLTVTIACSDYIQAAVVMPLVVALRARAPGV 125
           A  L  PLR  L++L A  +   FDPA  +    +A SDY+   ++  LV AL   APGV
Sbjct: 68  AEALVEPLRQVLEELHALRQPAIFDPARCERRFCLAASDYVAEHMLPLLVAALEREAPGV 127

Query: 126 RVAVRHLMPDLIEQQLASGETDLVLTTPRPTQAHLRTQHLFAETYVLIGRRGHP-RLRRG 184
            +  R          LASGE DL  T    +  +L  + L  +  V + R+ HP   +  
Sbjct: 128 SLEYRTWQAGQY-ALLASGEIDLATTLFDESPPNLHGRLLGEDRAVCLMRQDHPLAAQAA 186

Query: 185 LSIEDYAELEHVIVSPSGGQFRTPVDEGLAALGHRRSVVMSAASFLFIPEIVAASDVVAL 244
           LS  DY   +HV +S  GG   + +D  L A G +R V +    F    +++A+S  VA 
Sbjct: 187 LSQADYLAYKHVRIS-GGGDKDSFIDRHLRAQGLQRRVSLEVPFFCATVQVIASSQAVAT 245

Query: 245 VPRRLLRDPPARLVMIELPWLAEGFDVD------LLWHERTHGHAGQRWLRALIAEV 295
           VP  + R       + +L W   GF +D      ++WH+R    A  RWLR  + E+
Sbjct: 246 VPEHIARQLSR---LHDLAWRPLGF-IDHSQRYWVVWHQRLQASAEHRWLRNRVFEL 298