Pairwise Alignments

Query, 279 a.a., HTH-type transcriptional activator RhaS from Xanthobacter sp. DMC5

Subject, 269 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

 Score = 65.1 bits (157), Expect = 2e-15
 Identities = 73/253 (28%), Positives = 105/253 (41%), Gaps = 24/253 (9%)

Query: 27  HAHPHCHVLLKVEGADTQFAVGEGLVPLTDRSCVLVNGWEPHAYVHDPNRPKTIILALYI 86
           H+HP   +     G        +G   L   + VLV     HA    P    +  + L++
Sbjct: 32  HSHPTFSIGAVDAGRSHFTGAADGQQHLAPGTLVLVPAHRVHACNPAPGLAWSYQM-LHV 90

Query: 87  EPDWLKTFRPGWVASGGAGFFA-QP-----GGEVSPRIHRLTHDL-AAAMMAEPDAKAVH 139
           + DWL   R   + SG  G  A +P       EV  +   L   L ++A   E DA  + 
Sbjct: 91  DADWLTQLR---LESGLGGIEAGEPVRICREAEVYRQFCALNRLLFSSACNGEKDAALI- 146

Query: 140 EALLADLMIAVVERFTPWRSFSIRALDGQRRMDWRIRRVVDGMRANLAEEVDTSTLAKEA 199
            A L DL  +         +     L+G       + R+     A L+ EV    LA+EA
Sbjct: 147 -AFLGDLDFSAHPPLAAAPALQAATLNGL------LARIEHQDPAQLSLEV----LAREA 195

Query: 200 GLSRAHFFRLFEASTNVPPRIYLNVMRVEAAVAAVTAEDGSFTHISERLGFAAPSHFTRF 259
           GL R    R F A+T   P  YL   RV      + +E  +   ++ +LGFA  SHF R 
Sbjct: 196 GLGRYQLIRAFRAATGFTPHAYLLNARVNRG-RQLLSEGLALAEVAYQLGFADQSHFQRV 254

Query: 260 FRDHTGVTPSEFR 272
           F+ H GVTP ++R
Sbjct: 255 FKAHVGVTPGQYR 267