Pairwise Alignments

Query, 279 a.a., HTH-type transcriptional activator RhaS from Xanthobacter sp. DMC5

Subject, 276 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

 Score = 67.8 bits (164), Expect = 3e-16
 Identities = 57/213 (26%), Positives = 92/213 (43%), Gaps = 24/213 (11%)

Query: 71  VHD---PNRPKTIILALYIEPDWLKTFRPGWVASGGAGFFAQPGGEVSPRIHRLTHD--- 124
           +HD   P         LY+EP WL            A +   PG  +      L HD   
Sbjct: 69  IHDGLAPTEEGFTYSTLYLEPAWLDQ-------QLRALYEHAPGDSLPSFADTLCHDERL 121

Query: 125 -----LAAAMMAEPDAKAVHEALLADLMIAVVERFTPWRSFSIRALDGQRRMDWRIRRVV 179
                LA   + + D + V +  + DL+ A + R   WR    R ++   R+    +R  
Sbjct: 122 ARATALAFRAVHDQDLRIVRQTAMDDLL-ACLTRHLHWR----RRINPDPRLPLTAQRAR 176

Query: 180 DGMRANLAEEVDTSTLAKEAGLSRAHFFRLFEASTNVPPRIYLNVMRVEAAVAAVTAEDG 239
           D + ANL  ++    LA+  G+ R    R F+A+  + P  YL  +R+ A    + A+  
Sbjct: 177 DFLHANLERDIGLEDLAQACGIDRFRLTRAFKAAFGIAPHAYLIQLRL-ARARRLLAQGQ 235

Query: 240 SFTHISERLGFAAPSHFTRFFRDHTGVTPSEFR 272
           +   ++  LGFA  SH  R+FR    +TP+++R
Sbjct: 236 TPAEVAVALGFADQSHLGRWFRRAYQLTPADYR 268