Pairwise Alignments

Query, 279 a.a., HTH-type transcriptional activator RhaS from Xanthobacter sp. DMC5

Subject, 291 a.a., HTH-type transcriptional activator RhaR from Azospirillum sp. SherDot2

 Score =  290 bits (742), Expect = 3e-83
 Identities = 146/275 (53%), Positives = 189/275 (68%), Gaps = 2/275 (0%)

Query: 1   MSNALRIAHGAFGRVALLDMDRPLVRHAHPHCHVLLKVEGADTQFAVGEGLVPLTDRSCV 60
           MS A+RI  G+FGRVALLDMD  L+ HAHPHCHVL+K  GADT+FAVGE L PL D + V
Sbjct: 1   MSKAMRIHQGSFGRVALLDMDNALIHHAHPHCHVLIKASGADTRFAVGEQLYPLRDDTAV 60

Query: 61  LVNGWEPHAYVHDPNRPKTIILALYIEPDWLKTFRPGWVASGGAGFFAQPGGEVSPRIHR 120
           LVN WE H+Y H P  P+T+ILALYIEP WL   +    ASG  GFFAQ  GE++P I R
Sbjct: 61  LVNSWEAHSYAHQPGAPRTVILALYIEPRWLGAMQRELNASGNPGFFAQSCGELTPYIRR 120

Query: 121 LTHDLAAAMM-AEPDAKAVHEALLADLMIAVVERFTPWRSFSIRALDGQRRMDWRIRRVV 179
           L   +AA ++  +P  + + EAL  DLMIA+++RF+ WR+            D+RIR+ +
Sbjct: 121 LADRMAAELLYDDPSGERMEEALF-DLMIAIIDRFSEWRTLGGARYAAPMAGDFRIRQAI 179

Query: 180 DGMRANLAEEVDTSTLAKEAGLSRAHFFRLFEASTNVPPRIYLNVMRVEAAVAAVTAEDG 239
             MR  L EE D + +A  AGLSRAH FRLF+ +  + P +Y NV+R+EAA+ A+ A   
Sbjct: 180 LFMRGTLGEEFDAARVAAAAGLSRAHMFRLFQQTMAITPALYFNVLRMEAAIDAMAAGLE 239

Query: 240 SFTHISERLGFAAPSHFTRFFRDHTGVTPSEFRAI 274
           S T +S RLGF+APSHF+RFFR+H GVTP+E+R +
Sbjct: 240 SATEVSGRLGFSAPSHFSRFFRNHQGVTPTEYRRV 274