Pairwise Alignments

Query, 256 a.a., Putative aliphatic sulfonates transport permease protein SsuC from Xanthobacter sp. DMC5

Subject, 260 a.a., putative Nitrate ABC transporter, permease protein from Pseudomonas putida KT2440

 Score =  145 bits (365), Expect = 1e-39
 Identities = 80/244 (32%), Positives = 128/244 (52%), Gaps = 4/244 (1%)

Query: 13  IGLLTPLALLGLWEAAAR----MGLVDARFFPPPSSIVHTFGALVASGELWTNLLASLRR 68
           + L + LA L  W+ AA     +GL+   + P P +++     L+ S  L  +L +SL R
Sbjct: 10  VRLASLLACLLFWQVAANVKMDLGLLTFTYVPTPKAVLDAAWQLLTSSTLLAHLGSSLAR 69

Query: 69  LFLGMLLGGVPALFLGLAMGISKPLRAAIDPLISATYPIPKSAILPLVLLIFGLGEMSKV 128
           +F G     +  + LGL +G SK     + P +    PIP  A +PL +L+F   E+S V
Sbjct: 70  VFAGYATAALVGVALGLLIGRSKWAEDTLLPPLEVLRPIPAVAWIPLAILMFPSSELSMV 129

Query: 129 VMVALGAFYPILINTVMGVANIDKIYLDVGHNYRASRWQVFRTIALPGALPSIMAGVKLA 188
            +   GA +PIL+NTV GV  +D   +    +  A RW + R + LPGALPSI+ G+ + 
Sbjct: 130 FITFTGALFPILLNTVHGVEAVDPRLVASARSLGAGRWAILREVVLPGALPSIVTGLAIG 189

Query: 189 MGMGLILIAISEMVAASDGIGYMIWNAWQVLTVDTMYVGLLVIALLGFVFSVILDEIERM 248
           MG     +  +EM++   GIGY  W ++ +     + VG+L+I +LG   S ++  +  +
Sbjct: 190 MGTSWFCLVTAEMISGQFGIGYYTWESYTLQNYPDIVVGMLLIGVLGMGSSALVKRLGAL 249

Query: 249 LIPW 252
             PW
Sbjct: 250 ATPW 253