Pairwise Alignments

Query, 346 a.a., hypothetical protein from Xanthobacter sp. DMC5

Subject, 320 a.a., ABC transporter, substrate binding protein (nitrate/sulfonate) from Agrobacterium fabrum C58

 Score = 79.7 bits (195), Expect = 9e-20
 Identities = 86/326 (26%), Positives = 145/326 (44%), Gaps = 32/326 (9%)

Query: 15  LAMAFASAGTAQAADKVKVGINNVVSDVVFHLGIERGIFAEE-------GLDVQLIAFDS 67
           +A A   AG+A AA+ V +G    V      L  ++G   EE        ++++   F  
Sbjct: 14  VAAALLWAGSA-AAETVNIGFMPFVPYSAILLAKQKGWVDEEFTKAGLKDVEIKWHQFAG 72

Query: 68  GPKMVAPLGAGQIDVGAGASSAGLYNAAARGIDIKVV--ADKGSTPVHYDYMPLMVRKEL 125
           GP +     +G +D+ A   +  L  A A GID + V  A KG+         L+V K+ 
Sbjct: 73  GPPVNEAFASGALDIAALGDTPSLI-AFANGIDTRFVGLACKGAKAE-----ALIVLKD- 125

Query: 126 VDSGKVKTIADLKGMRVGSVGPGAATNAKMAHLLAKAGLTYKDVSHNYIGYPQQIAAFTT 185
                VKT+ DLKG +V ++  G   +  +  +LA+AGL   DV    +G      A T 
Sbjct: 126 ---SSVKTVKDLKGKKVATLR-GGNVHELLVLVLAEAGLKISDVEFLNLGLQDMGIALTK 181

Query: 186 GAIDAAITTEPSVTQAVNNGVAVRFVVDGYP-NQQVAVLLYGGDFIAKRRDVAQRFMNAY 244
           G +DA +  EP +T+  + GV+ R + DG      +  ++  G F AK  DV + ++ A 
Sbjct: 182 GDVDAVLVWEPLLTKLDSEGVS-RTLRDGAGLKSNLNPIVALGSFAAKHPDVLKAYLQAV 240

Query: 245 VKAARIFNDATAGGKFDGKGADEVIKTIMRTTGLKDAELFKTMIPNGIDPDGKVDVASMA 304
            + A          + D  G+ +V+  ++  T  +    F            + D A +A
Sbjct: 241 KRGAEAL-------RSDPAGSAQVLAPVVGLTPKQTELAFSRF--EWKPTVTEADQAELA 291

Query: 305 EDLKFFTENGYLERPAKVSDVVDTSF 330
           + +KF  +N ++ +  +VS   D +F
Sbjct: 292 DSVKFLLDNHFIRQTFEVSSFADQAF 317