Pairwise Alignments

Query, 994 a.a., DNA polymerase I from Xanthobacter sp. DMC5

Subject, 915 a.a., DNA polymerase I, 5 from Pseudomonas putida KT2440

 Score =  681 bits (1758), Expect = 0.0
 Identities = 414/990 (41%), Positives = 559/990 (56%), Gaps = 93/990 (9%)

Query: 16  LVDGSSFVFRAYFQSINQDRKYNFRSDRLPTGAVRLFCTKLFQFVRDGAVGIRPTHLAIV 75
           LVDGSS+++RA+             S  +PTGAV+     L    +     +     A+V
Sbjct: 8   LVDGSSYLYRAFHALPPLTT-----SKGMPTGAVKGVLNMLKSLRKQYPDSL----FAVV 58

Query: 76  FDKSEDSFRKELYPDYKANRSEPPDELIPQFPLMREAVRAFGLIPVEQARYEADDIIATY 135
           FD    +FR  ++ +YKANR   PD+L  Q   +  +V+A G   +     EADD+I T 
Sbjct: 59  FDAKGGTFRDAMFAEYKANRPSMPDDLRVQIEPLHASVKALGYPLLCVEGVEADDVIGTL 118

Query: 136 AEQAVKAGADVLIVSADKDLMQLIGPKVAMYDPASGESGGRGARPERRIGLGEVVEYFGV 195
           A  +   G  V+I + DKD+ QL+   + + +  +G            + +  V E FGV
Sbjct: 119 ARSSAALGRPVIISTGDKDMAQLVDGHITLVNTMTGSV----------LDVAGVHEKFGV 168

Query: 196 PPEKVMDVQALAGDSTDNVPGVPGIGIKTAAQLIAEYGD-LETLLARAGEIKQPKRRES- 253
            PE ++D  AL GD  DN+PGVPG+G KTA  L+   G  L  L A   ++     R + 
Sbjct: 169 GPEHIIDFLALMGDKVDNIPGVPGVGEKTAVGLLTGIGGGLSDLYANLDKVPALAIRGAK 228

Query: 254 -----LMNNQDAARISKQLVTLVRDVAVDVPLEDLVLEDPDARRLISFLKAMEFTTITRR 308
                L  ++DAA +S +L T+  DV +DV +E LV  +PD   L++    MEF +    
Sbjct: 229 TLPAKLEEHRDAAFLSYELATIKVDVPLDVEVEALVCGEPDREALLALYTEMEFKSWV-- 286

Query: 309 VAEAYGVEAGEVDPDPKLAPSGGDLFAPGGEPAAEAGAKPAQPADATAAPSGTPTPSDLA 368
                     E+  D   A   GD  AP  EPA +  AK                     
Sbjct: 287 ---------AELQRD---AAKAGDDVAPAVEPAVKVEAK--------------------- 313

Query: 369 HQRAQAARATPVDRKAYRTILDLAELKAWCAKAVDLGVVAFDTETNSLDPMQADLVGVSL 428
                           Y TILD A   AW  K     + AFDTET  LD  QA LVG+S 
Sbjct: 314 ----------------YETILDQARFDAWLEKLRQAPLFAFDTETTGLDAQQAQLVGLSF 357

Query: 429 ALSPNEACYIPLLHQGAGDGLFSEGLLPGQISLADAVAALKPMLEDKGTLKIGHNVKYDE 488
           A+ P+EA Y+PL H   G         P Q+     + ALKP+LED    K+G N KYD 
Sbjct: 358 AVEPHEAAYVPLAHDYEG--------APVQLDREAVLLALKPLLEDPAKAKVGQNAKYDI 409

Query: 489 LVLARHGIQVSPIDC---TMCMSYALDAGRNGHGMDELSVLHLGHQPIAYSEVTGKGKAQ 545
            +LA     +        TM  SY L++    H MD L+  +L H  IA+ ++ GKG  Q
Sbjct: 410 NILANGSPAIEMRGVAYDTMLESYVLNSTATRHDMDSLAQKYLDHTTIAFEDIAGKGAKQ 469

Query: 546 ITFDKVALEPATAYAAEDADVTLRLWQVLKPRLAAEGRTT-VYETLERPLIPVLARMESR 604
           +TF+++ L+ A  YAAEDAD+TLRL   L+ RLA       V   +E PL+PVLAR+E +
Sbjct: 470 LTFNQINLDKAGPYAAEDADITLRLHHALQARLAQTPSVQPVLMDIEMPLVPVLARIERQ 529

Query: 605 GIAIDKAILARLSSEFAQGAARVEDEIAELAGERLNVGSPKQMGDILFGKMGLPGGTKTA 664
           G  +D  +L   S E     A +E    ELAGE  N+GSPKQ+G IL+ K+G+P  +KTA
Sbjct: 530 GALVDAELLKVQSGELGVKMAELELRAYELAGETFNLGSPKQLGTILYDKLGMPVLSKTA 589

Query: 665 TGMWSTKATALEELAELGHKLPQKILEWRQLSKLRSTYTDALPNFVHPQTKRVHTSYALA 724
            G  ST    L+ELA  G+ LP+ ++++R LSKL+STYTD LP  ++P+T R+HTSY  A
Sbjct: 590 KGQPSTAEAVLDELALQGYPLPEVLMQYRSLSKLKSTYTDKLPGQINPRTGRIHTSYQQA 649

Query: 725 ATTTGRLSSSDPNLQNIPVRTEEGRRIRRAFVAEEGNLLVSADYSQIELRLLAEIAEIPA 784
              TGRLSSSDPNLQNIP+RT EGRRIR+AF+A  G  L++ADYSQIELR++A +A+   
Sbjct: 650 VAATGRLSSSDPNLQNIPIRTAEGRRIRQAFIASPGYKLLAADYSQIELRIMAHLAKDEG 709

Query: 785 LRQAFTDGLDIHAMTASEMFGVPVKDMPGEIRRRAKAINFGIIYGISAFGLANQLGIPRE 844
           L  AF + LD+H  TA+E+FGV ++D+  + RR AKAINFG+IYG+SAFGLA Q+G+ R+
Sbjct: 710 LLHAFRNDLDVHRATAAEVFGVALEDVTTDQRRSAKAINFGLIYGMSAFGLAKQIGVDRK 769

Query: 845 EAGQYIKRYFERFPGIRDYMEETKTFCREHGYVETLFGRRCHYPDIAAKNPSLRAFNERA 904
           ++  YI RYF R+PG+  YME T+    E G+VETLFGRR + PDI AKNP+LR   ER 
Sbjct: 770 QSQDYIDRYFARYPGVLAYMERTRAQAAEQGFVETLFGRRLYLPDINAKNPALRKGAERT 829

Query: 905 AINARLQGTAADIIRRAMIRMEPALEKAGLSARMLLQVHDELVFEVPEAEAEATIPVVRH 964
           AINA +QGTAADII+RAM++++  L ++GL AR++LQVHDELV EV E   +     +R 
Sbjct: 830 AINAPMQGTAADIIKRAMVKVDNWLSESGLDARVILQVHDELVLEVREDLVQQVKDEIRQ 889

Query: 965 AMESAAAPAVHLAVPLKVDARAAKNWEEAH 994
            M  AA     L VPL V+A    NW+EAH
Sbjct: 890 HMSQAA----QLDVPLLVEAGVGANWDEAH 915