Pairwise Alignments

Query, 367 a.a., HTH-type transcriptional repressor CytR from Xanthobacter sp. DMC5

Subject, 340 a.a., DNA-binding transcriptional repressor from Pseudomonas putida KT2440

 Score =  173 bits (438), Expect = 7e-48
 Identities = 113/332 (34%), Positives = 174/332 (52%), Gaps = 7/332 (2%)

Query: 15  ATLQSVADAVGVHRSTVARALDPEQSRRISADVVEKVQAEARRQGYRPDAVASSLRTGRS 74
           AT++ VA   G+  +TV+  L+  ++R +S  V  KV+A      Y P AVA SL+   +
Sbjct: 2   ATIKDVAALAGISYTTVSHVLN--KTRPVSEQVRLKVEAAIIELDYVPSAVARSLKARST 59

Query: 75  RLIGVVVPDLANPVFAPILGGIGATLAARGYSMMVADSGEDEAGQADIVEKLIARRVDGL 134
             IG++VP+  NP FA +  GI       GY +++ +S ++   Q   +  L+ +R+DGL
Sbjct: 60  ATIGLLVPNSVNPYFAELARGIEDACERNGYCVILCNSDDNPQKQRSYLRVLLEKRIDGL 119

Query: 135 VLATAKRDDATVSLCLKAGVPTVLVNRGEDGLRASTVVSDDTGGIAVAVAHLAGLGHRRI 194
           V+A+  +DD  +        P V+V+R  +G+ A  V  D   G  +A  HL  LGHR +
Sbjct: 120 VVASVGQDDDLLQSLASVRTPMVIVDRELEGVDADLVRIDHEQGAYLATRHLLELGHRDV 179

Query: 195 GHLAGPERLSTGVLRRRGFADAMAAAGLPADAVTTATA-YNREAGRVAAAELLD-RWPDI 252
            ++ GP       LR  GF  AMA AG P          +    G  AAA++L+ + P  
Sbjct: 180 AYIGGPAETGVTQLRLSGFRRAMAEAGAPVPGSRVLHCDFTSPGGHAAAAQVLEGKRP-- 237

Query: 253 TAIAASNDLIALGAYQEAQQRGLRIPQDLSIVGHNDMPLVDMVAPPLTTVRIGHEAMGAR 312
           +AI A ND+I  G  + A +R + +P +LS++G +D+ L   V P LTTV      +G  
Sbjct: 238 SAIFAGNDMIGFGVLRAAAERNISVPGELSVIGFDDIELSRYVYPSLTTVGQSIRELGES 297

Query: 313 AASILLDQIAQP-ETPPTLALVPARLIARAST 343
           AAS+LL +IA P +      +V  R++ R ST
Sbjct: 298 AASLLLTRIATPRQGAAEQRIVAPRIVLREST 329