Pairwise Alignments

Query, 329 a.a., Oligopeptide transport ATP-binding protein OppD from Xanthobacter sp. DMC5

Subject, 337 a.a., oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain from Enterobacter asburiae PDN3

 Score =  301 bits (771), Expect = 2e-86
 Identities = 152/314 (48%), Positives = 207/314 (65%), Gaps = 1/314 (0%)

Query: 6   TPLVDIRDLTIRFTGERTVHAVNGVSLSLGEGEVLGLLGESGSGKSVTMRALMRLLPKRR 65
           TP++ +++L + F G   V  ++G+SL++  GE L L+GESG GKS+T  ALM LLP   
Sbjct: 10  TPVLRVQNLNVTFAGS-PVSVLDGISLTVRAGETLALVGESGCGKSITSLALMGLLPASA 68

Query: 66  SVISGSVHVAGQDVLAMDDATLSDFRGRTVSMIFQEPALALDPVYTIGRQISESVMRHEG 125
            ++SG +     D+  +     +D RG  ++MIFQEP  +L+P +T+G Q+SE+VMRH+ 
Sbjct: 69  QIVSGEMQFRRHDLRKLSPREYADLRGSELAMIFQEPMTSLNPAFTLGDQLSEAVMRHQS 128

Query: 126 ASQRDATARALEMLELVRIPSAKRRLDAYPHEMSGGMRQRAMIALALACRPKILLADEPT 185
            S+ +A   AL++LE V+IP+A+ RL AYPH++SGGMRQR MIA+AL   PK+L+ADEPT
Sbjct: 129 VSRAEAMKVALQILEKVQIPAAEMRLKAYPHQLSGGMRQRVMIAMALINHPKLLIADEPT 188

Query: 186 TALDATVQIQILLLLRELQREMGMSVIFVTHDIGVAIEICDKVAVMYAGQIVETGTLGEI 245
           TALD T+Q QIL LL  L+ E G +V+ +THD+GV  E+  +VAVMYAGQ+VE G++  I
Sbjct: 189 TALDVTIQAQILALLNALKEETGTAVLMITHDLGVVAEVAQQVAVMYAGQVVEQGSVEAI 248

Query: 246 VRTPQHPYPRGLLASTVHGAARGARLETIPGTPPSLDKAPVACSFAPRCAFVQPRCTVAP 305
              PQHPY  GL+ S     AR  +L TIPG+ P  +  P  C FA RC F Q RC    
Sbjct: 249 FADPQHPYTIGLMGSIPSLGARKGQLSTIPGSVPLPESMPKGCRFATRCPFAQSRCHDEK 308

Query: 306 PPLVHLGPGRDVRC 319
           P L  LG G  V C
Sbjct: 309 PQLTTLGAGHQVAC 322