Pairwise Alignments

Query, 320 a.a., hypothetical protein from Xanthobacter sp. DMC5

Subject, 261 a.a., lysine / arginine / ornithine ABC transporter - periplasmic binding protein from Pseudomonas putida KT2440

 Score =  105 bits (261), Expect = 2e-27
 Identities = 62/234 (26%), Positives = 114/234 (48%), Gaps = 3/234 (1%)

Query: 89  KELRFVTTDDYPPFNFINSTGALSGFNIDLARAICAELSVTCSFQTAAFADVADVVDQGR 148
           K L+      YPPF F    G+++GF+ D+  A+C E+   C++    F  +   +   +
Sbjct: 24  KPLKIGIEAAYPPFAFKQPDGSIAGFDYDIGNALCEEMKTKCTWVEQEFDGLIPALKVRK 83

Query: 149 AEAAVAGLVATPASRATLDFSERYLGTPARFVGKKQETLAKATPEEVASKKVAVVSRTAH 208
            +A ++ +  T   + ++DF++RY  TPAR V K   T++ +  +E+  KK+ V   + H
Sbjct: 84  IDAILSSMSITDDRKKSVDFTKRYYLTPARLVMKDGTTVSDSL-DELKGKKIGVQRGSIH 142

Query: 209 EAYLRSFFNE--AAIRPYPDLKAAQEALKAGQVDLLFGDGITLALWLNGTDSAACCRFVG 266
           + + +       A + PY         + AG++D    D   L      TD+     FVG
Sbjct: 143 DRFAKEVLGAKGATVVPYGTQNEIYLDVAAGRLDGTVADATLLEDGFLKTDAGKGFAFVG 202

Query: 267 GPFTESRFFGDGFSVAVKEGNDTLRHAMDFALQRIWEKGVYTDLYLRWFPVGFY 320
             FT++++FGDG  +AV++G+      ++ A+  I   G Y ++  ++F    Y
Sbjct: 203 PAFTDAKYFGDGIGIAVRKGDKANVDRINAAIDAIRANGKYKEIESKYFNFDIY 256