Pairwise Alignments

Query, 493 a.a., Replicative DNA helicase from Xanthobacter sp. DMC5

Subject, 468 a.a., Replicative DNA helicase (DnaB) (EC 3.6.4.12) from Variovorax sp. SCN45

 Score =  316 bits (809), Expect = 1e-90
 Identities = 192/477 (40%), Positives = 271/477 (56%), Gaps = 37/477 (7%)

Query: 15  RQAPHNVEAEQALLGAILVNNEAFYRVSDFLEPRHFYEPIHARVFELASALIRAGKLATP 74
           R  PH++EAE ++LG +L++N A+ R+ D L    FY   H  ++     LI A K A  
Sbjct: 22  RIPPHSIEAESSVLGGLLLDNGAWDRMGDLLVDGDFYRHEHKLIYAAIGGLINASKPADV 81

Query: 75  VTIKTFLPADLDVAGLTGPQYLARLAAEATTVINSEDYGRTIYDLSVRRDLIRIGEEIVN 134
           +T+   L        + G  YL  LA    +  N   Y   + + S+ R L+   +EI  
Sbjct: 82  ITVYEQLQNLGKADEIGGLVYLNSLAQYVPSASNIRRYAEIVRERSILRKLVSAADEIAT 141

Query: 135 EAYDAPVDATPQDQIEEAEKRLYEIAETG-RYDGGFQRFGEALRESVDMASKAFQRDGHL 193
           +A++ P        ++EAE++++ I E G R   GFQ     + E +D  ++  +    +
Sbjct: 142 QAFN-PQGKQVDKILDEAEQKIFNIGEEGTRMKQGFQSMDALVVELLDRVTEMAENPNDI 200

Query: 194 SGIATALDDLDHQMGGLQPSDLVILAGRPAMGKTSLATNIAFNIAAAYRGETRPDGSTET 253
           +GI T   D D    GLQP D+++LA RP+MGKTSLA NIA ++A               
Sbjct: 201 TGIRTGFHDFDKMTSGLQPGDMIVLAARPSMGKTSLAINIAEHVALE------------- 247

Query: 254 VSGGVVGFFSLEMSAEQLATRILAEQAEIASYKIRRGDISESEFSKLAAAAQTMQTIPLY 313
             G  V  FS+EM A QLA RI+     I    +R G +S+ E+ +L  A + ++T+ L+
Sbjct: 248 -EGLPVAVFSMEMGASQLAVRIVGSIGRIDQGHLRTGKLSDEEWPRLTEAIEKLRTVSLH 306

Query: 314 IDDTGGISIAQLVARARRLKRQRG-LDFMVIDYLQLLSGSSKASSQNRVQEITEITTGLK 372
           ID+T G+S ++L A ARRL RQ G L  +V+DYLQL+S SS +  +NR   + EI+ GLK
Sbjct: 307 IDETPGLSTSELRANARRLARQYGRLGLIVVDYLQLMSTSS-SGDENRATAVGEISRGLK 365

Query: 373 ALAKELQVPVMALSQLSRQVEARDDKRPQLSDLRESGSIEQDADVVMFVYREEYYLK-SK 431
            LAKEL+ PV+ALSQLSR VE+R DKRP +SDLRESG+IEQDAD++MF+YR++YY K SK
Sbjct: 366 MLAKELKCPVIALSQLSRGVESRTDKRPMMSDLRESGAIEQDADIIMFIYRDDYYDKNSK 425

Query: 432 EPKPGTEEWFKWEIEMKAAENTAEIIIGKQRHGPTGTVKVHFEPQFTRFSNLAREDH 488
           EP                    AE+II K R+GPTGTVK+ F    T+F NLA   H
Sbjct: 426 EP------------------GVAEVIISKHRNGPTGTVKLAFLKPITKFENLASYSH 464