Pairwise Alignments

Query, 470 a.a., UDP-N-acetylmuramate--L-alanine ligase from Xanthobacter sp. DMC5

Subject, 450 a.a., UDP-N-acetylmuramoylalanine--D-glutamate ligase from Pseudomonas putida KT2440

 Score = 76.6 bits (187), Expect = 2e-18
 Identities = 99/386 (25%), Positives = 158/386 (40%), Gaps = 45/386 (11%)

Query: 13  VGIGGIGMSGIAEVLHNLGYEVQGSDVADSA-NVKRLREHGIKVMIGHAAANVD---DAE 68
           VG+G  GMS +   L + G     +D  +    ++ LR    +V +     +VD    A 
Sbjct: 15  VGLGKSGMS-LVRFLASRGIAFAVADTREQPPELETLRRDYPQVEVRCGELDVDFLCRAN 73

Query: 69  VVVVSSAIKRDNPELMAARAKRLPVVRRAEMLAELMRLKSCVSIAGTHGKTTTTSLVATL 128
            + VS  +    P L  A A+ + +    E+ A   +    V+I+G++ K+T T+LV  +
Sbjct: 74  ELYVSPGLALATPALQQAAARGVKLSGDIELFARHAKAP-IVAISGSNAKSTVTTLVGEM 132

Query: 129 LDAGNFDPTVINGGIINAYGTNARLGDGNWMVVEADESD-GTFLKLPTEVAIVTNVDPEH 187
             A      V  GG +     +    D    V+E       T  +L  EVA V N+  +H
Sbjct: 133 --AAKAGKRVAVGGNLGTPALDLLADDIELYVLELSSFQLETTDQLNAEVATVLNISEDH 190

Query: 188 LDHFKTFDKVQEAFKAFVENVPFYGFAVMCIDHPVVQALVGR---------IEDRRVITY 238
           +D +                +P Y  A   I     Q +V R         +E R   T+
Sbjct: 191 MDRYS--------------GLPAYHLAKHRIFRGARQVVVNRQDALSRPLPVEGRPCWTF 236

Query: 239 GENPQADVRLVDVDLKGGVTKFGVVFRNRAGETVHEIRGLRLPMPGKHNALNATAAIAVA 298
           G NP  D +   +    G       F     +T+   R L++   G HN  NA AA+A+ 
Sbjct: 237 GLNPP-DFKAFGLREVDGEKYLAFEF-----QTLMPARELKVR--GAHNQSNALAALALG 288

Query: 299 HELKVPDEKIIEAISQFGGVKRRFTRTGEWNGVTVYDDYGHHPVEIA-AVLKAARAASDG 357
           H   +P E ++EA+ +FGG+  R     E NGV  YDD     V  A A ++   A  +G
Sbjct: 289 HAAGLPFEPMLEALREFGGLAHRCQWVRERNGVNWYDDSKATNVGAALAAIEGLGADIEG 348

Query: 358 QVIAVV----QPHRYTRLASLFDEFC 379
           +++ +     +   +T L      FC
Sbjct: 349 KLVLIAGGDGKGAEFTALREPVKRFC 374