Pairwise Alignments

Query, 292 a.a., High-affinity branched-chain amino acid transport system permease protein LivH from Xanthobacter sp. DMC5

Subject, 304 a.a., branched-chain amino acid transporter permease subunit LivH from Pseudomonas simiae WCS417

 Score =  127 bits (318), Expect = 4e-34
 Identities = 86/301 (28%), Positives = 152/301 (50%), Gaps = 20/301 (6%)

Query: 1   MDWLFFTEVTLAGLGSGALLSLTALSFVLIYKATRVINLAVGEILMLGGYLF---FAFVT 57
           MD +F  ++ + GL  G++  L A+ + ++Y    +IN A GE+ M+  YL     A + 
Sbjct: 1   MDGIFLQQL-VNGLTLGSVYGLIAIGYTMVYGIIGMINFAHGEVYMISAYLAAISLALLA 59

Query: 58  AFGLATWLAIPLAIAGGVLF--------GFVVERTLIRPMLGESSISVLMLTVGLGSVLI 109
            FG+ ++   PL I G ++F        G+V+ER   +P+   + ++ L+  +G+  +L 
Sbjct: 60  YFGIESF---PLLILGTLIFTVVVTGVYGWVIERVAYKPLRNSTRLAPLISAIGISLILQ 116

Query: 110 GATELIWNTDPRALPDFMGQA-PVFIGEAYVSRKIAIGFVVSALV--IALFLVLFRFWRG 166
              ++      + +P  +  A  V IG  +V       F++ A    +AL   + ++ + 
Sbjct: 117 NYAQIAQGAKQQGIPTLLAGAWRVDIGSGFVQLTYTKVFILVAAFAGMALLTYVIKYTKL 176

Query: 167 GVALRATATDQAAAYSCGINVPAVFSLAWMVACATAAGAGLLVGAIGGISPTMGVF--GL 224
           G   RAT  D+  A   GIN   V S  +++  A AA AG+L+    G       F  G+
Sbjct: 177 GRMCRATQQDRKMASILGINTDRVISYVFVIGAAMAALAGVLITLNYGTFDFYAGFIIGI 236

Query: 225 SALVVVIIGGLDSVLGALIGGILIGLVEAWAGTFLGGEYKLVTTFSILIAALMIRPYGLF 284
            A    ++GG+ S+ GA++GGI++G+ E+     +  +YK V +FS+L+  L+ RP GL 
Sbjct: 237 KAFTAAVLGGIGSLPGAMLGGIILGISESLFSGLINSDYKDVFSFSLLVVILIFRPQGLL 296

Query: 285 G 285
           G
Sbjct: 297 G 297