Pairwise Alignments

Query, 292 a.a., High-affinity branched-chain amino acid transport system permease protein LivH from Xanthobacter sp. DMC5

Subject, 304 a.a., High-affinity branched-chain amino acid transport system permease protein BraD from Pseudomonas putida KT2440

 Score =  123 bits (309), Expect = 4e-33
 Identities = 83/301 (27%), Positives = 151/301 (50%), Gaps = 20/301 (6%)

Query: 1   MDWLFFTEVTLAGLGSGALLSLTALSFVLIYKATRVINLAVGEILMLGGYLF---FAFVT 57
           MD +F  ++ + GL  G++  L A+ + ++Y    +IN A GE+ M+  YL     A + 
Sbjct: 1   MDGIFLQQL-VNGLTLGSVYGLIAIGYTMVYGIIGMINFAHGEVYMISAYLAAISLALLA 59

Query: 58  AFGLATWLAIPLAIAGGVLF--------GFVVERTLIRPMLGESSISVLMLTVGLGSVLI 109
            FG+ ++   PL + G +LF        GF +ER   +P+   + ++ L+  +G+  +L 
Sbjct: 60  YFGVESF---PLLMLGTLLFTIVVTGVYGFTIERIAYKPLRNSTRLAPLISAIGISLILQ 116

Query: 110 GATELIWNTDPRALPDFM-GQAPVFIGEAYVSRKIAIGFVVSALVIALFLVLF--RFWRG 166
              ++      + +P  + G   V +G  +V       F++ A  + + L+ +  ++ + 
Sbjct: 117 NYAQISQGARQQGVPTLLEGAMRVEVGSGFVQLTYTKIFILVAAFVGMGLLTYVIKYTKL 176

Query: 167 GVALRATATDQAAAYSCGINVPAVFSLAWMVACATAAGAGLLVGAIGGISPTMGVF--GL 224
           G   RAT  D+  A   GIN   V S  +++    AA AG+L+    G       F  G+
Sbjct: 177 GRMCRATQQDRKMASILGINTDRVISYVFVIGAVMAALAGVLITMNYGTFDFYAGFIIGI 236

Query: 225 SALVVVIIGGLDSVLGALIGGILIGLVEAWAGTFLGGEYKLVTTFSILIAALMIRPYGLF 284
            A    ++GG+ S+ GA++GGI++G+ E+     +  +YK V +FS+L+  L+ RP GL 
Sbjct: 237 KAFTAAVLGGIGSLPGAMLGGIILGISESLFSGLINSDYKDVFSFSLLVMILIFRPQGLL 296

Query: 285 G 285
           G
Sbjct: 297 G 297